PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1004530.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NF-YB | ||||||||
Protein Properties | Length: 134aa MW: 15601 Da PI: 10.0459 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 137.1 | 5e-43 | 1 | 82 | 16 | 97 |
NF-YB 16 imkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +mkk l +nakiskdaketvqecvsefisf t+eas kc+rekrktingddllwa++tlGf++yveplk+y++k+re++gek Pd.00g1004530.m01 1 MMKKGLTGNAKISKDAKETVQECVSEFISFTTGEASGKCRREKRKTINGDDLLWAMTTLGFKEYVEPLKIYFHKFREMKGEK 82 69*****************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence |
MMKKGLTGNA KISKDAKETV QECVSEFISF TTGEASGKCR REKRKTINGD DLLWAMTTLG 60 FKEYVEPLKI YFHKFREMKG EKTAGKGMAR QLLYADHHPH GYHDQRQREQ LQHLHAPGMN 120 MYVDPLVYKA WRPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 1e-47 | NF-YB family protein |