PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1004210.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 300aa    MW: 32525.7 Da    PI: 6.9962
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1004210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.53.2e-333084155
            G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                       kprlrWt +LHerFv+av+qLGGs kAtPk+i+++m+vkgLtl h+kSHLQkYRl
  Pd.00g1004210.m01 30 KPRLRWTADLHERFVDAVTQLGGSSKATPKAIMRTMNVKGLTLFHLKSHLQKYRL 84
                       79****************************************************8 PP
2Myb_DNA-binding66.54.8e-213283148
                       TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                       r+rWT++++e++vdav+qlGg    t+k+I+rtm+ kg+tl ++ks++qky+
  Pd.00g1004210.m01 32 RLRWTADLHERFVDAVTQLGGSskaTPKAIMRTMNvKGLTLFHLKSHLQKYR 83
                       89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MQAPHEGIAG QEDMQGHRGD PCLVLTSDPK PRLRWTADLH ERFVDAVTQL GGSSKATPKA  60
IMRTMNVKGL TLFHLKSHLQ KYRLGKQSGK EMGDVSKDAS YLLESPGTGN SSPNLPTSDL  120
NEGYEVKEAL RAQMEVQSKL HVQVEAEKHL QIRQDAERRY MAMLERACKM LADQFIGGSV  180
TDTDSHKCHG LGNKNTKGPS LDPLGFYSLQ STDVAGVHGP EEEVPTSIHT QRADCSTESC  240
LTSHESPGGL TLEGSPGGGK KRMLSLDSAA ASLIWGEAKV RTQEINVAAV NPHGIARYGM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.16e-67G2-like family protein