PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1002850.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 263aa    MW: 29905.3 Da    PI: 8.8501
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1002850.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.92e-272274356
            G2-like  3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
                       +++WtpeLH++Fv+aveqL G ++A+P++ilelmk +gLt+++v+SHLQkYR++
  Pd.00g1002850.m01 22 QVDWTPELHKKFVQAVEQL-GVDQAIPSRILELMKAEGLTRHNVASHLQKYRMH 74
                       579****************.********************************97 PP
2Myb_DNA-binding45.41.8e-142472348
                       SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
    Myb_DNA-binding  3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48
                        WT+e+++++v+av+qlG +   +++I + m  +g+t+ ++ s++qky+
  Pd.00g1002850.m01 24 DWTPELHKKFVQAVEQLGVDqaIPSRILELMKaEGLTRHNVASHLQKYR 72
                       5***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MLWSCQLSLK MEKTSPPKSM LQVDWTPELH KKFVQAVEQL GVDQAIPSRI LELMKAEGLT  60
RHNVASHLQK YRMHKRHILP KEDDRRLPHP RDPIQRSYYP QNQKPIMAFP PYHYNNSLSM  120
APVYPMWGQP GSQPAGVQMW GSPGFPQWQQ SESWHWKPYQ GMQADAWGCP VMPPLQGGYP  180
SYPQNAAGFH AGVVDNGCSM QHNSFDLHPA EEVVDKVVKE AISKPWLPLP LGLKPPSTEG  240
VLDELSRQGI CNIPPHINRS NTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.33e-49ARR-B family protein