PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1002830.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 551aa    MW: 61304.2 Da    PI: 6.7257
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1002830.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like871.8e-27308362156
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                        k +++WtpeLH++Fv+aveqL G ++A+P++ilelmk +gLt+++v+SHLQkYR++
  Pd.00g1002830.m01 308 KMKVDWTPELHKKFVQAVEQL-GVDQAIPSRILELMKAEGLTRHNVASHLQKYRMH 362
                        5689*****************.********************************96 PP
2Myb_DNA-binding44.73e-14311360248
                        SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
    Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                          WT+e+++++v+av+qlG +   +++I + m  +g+t+ ++ s++qky+
  Pd.00g1002830.m01 311 VDWTPELHKKFVQAVEQLGVDqaIPSRILELMKaEGLTRHNVASHLQKYR 360
                        57***********************************************7 PP
3Response_reg29.15e-11201261109
                        EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS
       Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 
                        vl+ d++++ +  +++ le  +y +v+++ + +eal  +  +   +++ ++ ++ ++  G+ +++ +++++ +lp i+ +     +++ +++
  Pd.00g1002830.m01  20 VLLLDEDNSSAAEIKSKLEAMDY-IVTTFCNETEALSAFSSNPqsFQVAIVEVNASN--GHGVFQFLETAK-DLPTIMTSNIHCLSTMMKCI 107
                        7999999****************.***************776666999999988765..666788888877.9****9999999******** PP

                        HTTESEEEESS--HHHHHH CS
       Response_reg  91 kaGakdflsKpfdpeelvk 109
                         +Ga +fl Kp ++++l++
  Pd.00g1002830.m01 108 ALGAVEFLRKPLSEDKLRN 126
                        ****************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    
MVCTANDLQE WKDFPKGLKV LLLDEDNSSA AEIKSKLEAM DYIVTTFCNE TEALSAFSSN  60
PQSFQVAIVE VNASNGHGVF QFLETAKDLP TIMTSNIHCL STMMKCIALG AVEFLRKPLS  120
EDKLRNIWQH VVHKAFNAGG SAISESLKPV KESVVSILQI KQETEEQKCK ISVETENVSR  180
VHESDREQSV GSDKYPAPST PQLKQGSRLL ADGDCQDQIN CLSEKESGEN DGESKSVETT  240
CGNPIDEGTV QMSEPQMTRK RVVKEENDSV NGSQHPHNRN SANDVGGAAE NLSKASAPNN  300
SCKSSRKKMK VDWTPELHKK FVQAVEQLGV DQAIPSRILE LMKAEGLTRH NVASHLQKYR  360
MHKRHILPKE DDRRLPHPRD PIQRSYYPQN QKPIMAFPPY HYNNSLSMAP VYPMWGQPGS  420
QPAGVQMWGS PGFPQWQQSE SWHWKPYQGM QADAWGCPVM PPLQGGYPSY PQNAAGFHAG  480
VVDNGCSMQH NSFDLHPAEE VVDKVVKEAI SKPWLPLPLG LKPPSTEGVL DELSRQGICK  540
IPPHINRSNT R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-147ARR-B family protein