PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1000380.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 1168aa MW: 134209 Da PI: 7.0039

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1000380.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	74.4	2.1e-23	967	1060	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 +r+w+e De+++LqGl+d+ a+ g s +d++ fy ++ +s +++ksql+eK+rr+++Kf+ +++ ++g + s ++hd+ ++ls Pd.00g1000380.m01 967 YHRIWTEPDELLFLQGLLDC-ASDGFSFPKDLHLFYARFSTTVSQHYTKSQLSEKLRRFRRKFRVVSARLARGLHESQLSPHDRALYDLS 1055 68*****************.7789999*********************************************************** PP DUF573 93 kkiWg 97 +k+W Pd.00g1000380.m01 1056 RKLWS 1060 **7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1168 aa Download sequence
MILQTTFPGH SLWSSCSAHR LHPFLFSKRR RRSSLSYWHF NRLRPRLFAV AASENGVFTS 60 PEIAKTFDFT SEEGIYNWWE SQGYFRPNLD RGSDPFVISM PPPNVTGSLH MGHAMFVTLE 120 DIMVRYHRMK GRPTLWLPGT DHAGIATQLV VEKMLASEGI KRVELGRDEF VNRVWEWKEK 180 YGGTITNQIK RLGASCDWNR EHFTLDEQLS RAVIEAFVRL HEKGLIYQGS YMVNWSPSLQ 240 TAVSDLEVEY HEESGTLYYI KYRVAGGSKS DYLTIATTRP ETLFGDVAIA VNPEDDRYSK 300 YINRMAIVPL TYGRHVPIIS DKHVDKDFGT GVLKISPGHD HNDYNLARKL GLPILNVMNK 360 DATLNKVAGL YCGLDRFEAR KKLWADLEET GLAVKKEPHT LRVPRSQRGG EVIEPLVSKQ 420 WFVTMEPLAE KALRAVEKGD LKIIPERFEK IYNHWLSNIK DWCISRQLWW GHRIPVWYIV 480 GKDCEEEYIV ARSEDEALQK AQKKYGRDTK IYQDPDVLDT WFSSALWPFS TLGWPDESIE 540 DFKRFYPTTM LETGHDILFF WVARMVMMGI EFTGTVPFKY VYLHGLIRDS QGRKMSKTLG 600 NVIDPLDTIK EYGTDALRFT IALGTAGQDL NLSTERLTSN KAFTNKLWNA GKFVLQNLPS 660 QNDASAWENI LSYKFDKVEL LDKLPLPECW VISKLHLLID IVTASYDKFF FGDVGRETYE 720 FFWGDFADWY IEASKARLYH SGGDSVASVT QAVLLYVFEN ILKLLHPFMP FVTEELWQAL 780 PYRKEALIIS PWPLTSLPRK SNSIKKFENL QALTRAIRNA RAEYSVEPVK RISASIVANE 840 EVTEYIVKEK EVLALLSRLD LQNIHFTDSP PGNADQSVHL VAGEGLEAYL PLADMIDITA 900 EIQRLSKRLS KMQTEYDGLK ARLSSPKFVE KAPEDIVRGV QEKAAETEEK ITLTKNQDGQ 960 RTPPFKYHRI WTEPDELLFL QGLLDCASDG FSFPKDLHLF YARFSTTVSQ HYTKSQLSEK 1020 LRRFRRKFRV VSARLARGLH ESQLSPHDRA LYDLSRKLWS SECWSTSPFG NKAKSDEGDD 1080 NLMVNQNQSV LDDLFVENDY GDEVKMINLS RPIAGLAAKA VLDVFDQSLN EGKTALDFER 1140 QWQLQRLAEL DVLSQRLRLV LDNTIRGQ

Sequence ? help Back to Top

Protein Sequence Length: 1168 aa Download sequence

MILQTTFPGH SLWSSCSAHR LHPFLFSKRR RRSSLSYWHF NRLRPRLFAV AASENGVFTS  60
PEIAKTFDFT SEEGIYNWWE SQGYFRPNLD RGSDPFVISM PPPNVTGSLH MGHAMFVTLE  120
DIMVRYHRMK GRPTLWLPGT DHAGIATQLV VEKMLASEGI KRVELGRDEF VNRVWEWKEK  180
YGGTITNQIK RLGASCDWNR EHFTLDEQLS RAVIEAFVRL HEKGLIYQGS YMVNWSPSLQ  240
TAVSDLEVEY HEESGTLYYI KYRVAGGSKS DYLTIATTRP ETLFGDVAIA VNPEDDRYSK  300
YINRMAIVPL TYGRHVPIIS DKHVDKDFGT GVLKISPGHD HNDYNLARKL GLPILNVMNK  360
DATLNKVAGL YCGLDRFEAR KKLWADLEET GLAVKKEPHT LRVPRSQRGG EVIEPLVSKQ  420
WFVTMEPLAE KALRAVEKGD LKIIPERFEK IYNHWLSNIK DWCISRQLWW GHRIPVWYIV  480
GKDCEEEYIV ARSEDEALQK AQKKYGRDTK IYQDPDVLDT WFSSALWPFS TLGWPDESIE  540
DFKRFYPTTM LETGHDILFF WVARMVMMGI EFTGTVPFKY VYLHGLIRDS QGRKMSKTLG  600
NVIDPLDTIK EYGTDALRFT IALGTAGQDL NLSTERLTSN KAFTNKLWNA GKFVLQNLPS  660
QNDASAWENI LSYKFDKVEL LDKLPLPECW VISKLHLLID IVTASYDKFF FGDVGRETYE  720
FFWGDFADWY IEASKARLYH SGGDSVASVT QAVLLYVFEN ILKLLHPFMP FVTEELWQAL  780
PYRKEALIIS PWPLTSLPRK SNSIKKFENL QALTRAIRNA RAEYSVEPVK RISASIVANE  840
EVTEYIVKEK EVLALLSRLD LQNIHFTDSP PGNADQSVHL VAGEGLEAYL PLADMIDITA  900
EIQRLSKRLS KMQTEYDGLK ARLSSPKFVE KAPEDIVRGV QEKAAETEEK ITLTKNQDGQ  960
RTPPFKYHRI WTEPDELLFL QGLLDCASDG FSFPKDLHLF YARFSTTVSQ HYTKSQLSEK  1020
LRRFRRKFRV VSARLARGLH ESQLSPHDRA LYDLSRKLWS SECWSTSPFG NKAKSDEGDD  1080
NLMVNQNQSV LDDLFVENDY GDEVKMINLS RPIAGLAAKA VLDVFDQSLN EGKTALDFER  1140
QWQLQRLAEL DVLSQRLRLV LDNTIRGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	1e-07	GeBP family protein