PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1000240.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 246aa MW: 28838.4 Da PI: 8.5814

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1000240.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.9	1.3e-14	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed+ll ++++++G g W+ ++ + g+ R++ +c++rw++yl Pd.00g1000240.m01 10 KGAWTRKEDDLLRQCIEKHGEGKWHQVPYKAGLSRCRRSCRLRWLNYL 57 79********************************************97 PP
2	Myb_DNA-binding	46.9	6.5e-15	63	106	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg + ++E +l+++++k+lG++ W++Iar+++ gRt++++k++w++ Pd.00g1000240.m01 63 RGDFMEDEVDLIIRLHKLLGNR-WSLIARRLP-GRTANDVKNYWNT 106 678889**************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MEGYNLGVRK GAWTRKEDDL LRQCIEKHGE GKWHQVPYKA GLSRCRRSCR LRWLNYLKPN 60 IKRGDFMEDE VDLIIRLHKL LGNRWSLIAR RLPGRTANDV KNYWNTRSRK DYCMKKMKDK 120 SQETIKTIIR PQPRSFTKSS NCLSFKEPIL DRTQLEEDFS TPSQTSTSTR IGSDWWETFL 180 DDKDATERAT GSGLGLDEEL LASFWVDDDM PQSTRTCVNS SEEGLSRGDF SFSVDLWDHS 240 NEEWRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-54	MYB family protein