PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g097360.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 438aa MW: 48892.9 Da PI: 10.0196

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g097360.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.5	4.7e-13	357	437	15	98
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +l +p +fa+++ +k +++t+tl+ + rsW v+li k ++ l++G +eFv n L e D+++F+l++r++ l+v++fr Pd.00g097360.m01 357 ILHVPVTFARSFVKK--RKQTVTLQV-RERSWPVNLIGHTKVSGAKLSGGRREFVTKNCLMEEDVCMFELIERNDIVLKVHIFR 437 5789***999755..444677655.78***9877777899*********************999999**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MTDPTVNETT SKSGGGGSDA SRIGEVKQWL TQEFSQAGKE VPDFEYTPRS VAYLHNLATL 60 SQAQTQASKI LTSDFRLKAS EYRAQAARIG EILESVGLAQ EGLASNVVSS AQVLANVANL 120 LNIRDTELSS FLVAMGDISL RKTGVEEKRA KAQKESNILL DYTRKAISRL TYLKRTLAQL 180 EDDAGQCEAH IEHWKNNLAL MLGKEKQYNQ ETVRFKDTLN RVGYTPDISH GVLVGLAEER 240 KELEKKTKPV LDTLRSYQDL PPDKALAALA IEDKKRQYAA AEKYFEDVLH TALSTSKPAF 300 CVSTKAPCIS GKYKRLKTGG QVTQRPLNSS SRALEAANRF TPKNPSFRAT LRSTRLILHV 360 PVTFARSFVK KRKQTVTLQV RERSWPVNLI GHTKVSGAKL SGGRREFVTK NCLMEEDVCM 420 FELIERNDIV LKVHIFRC

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MTDPTVNETT SKSGGGGSDA SRIGEVKQWL TQEFSQAGKE VPDFEYTPRS VAYLHNLATL  60
SQAQTQASKI LTSDFRLKAS EYRAQAARIG EILESVGLAQ EGLASNVVSS AQVLANVANL  120
LNIRDTELSS FLVAMGDISL RKTGVEEKRA KAQKESNILL DYTRKAISRL TYLKRTLAQL  180
EDDAGQCEAH IEHWKNNLAL MLGKEKQYNQ ETVRFKDTLN RVGYTPDISH GVLVGLAEER  240
KELEKKTKPV LDTLRSYQDL PPDKALAALA IEDKKRQYAA AEKYFEDVLH TALSTSKPAF  300
CVSTKAPCIS GKYKRLKTGG QVTQRPLNSS SRALEAANRF TPKNPSFRAT LRSTRLILHV  360
PVTFARSFVK KRKQTVTLQV RERSWPVNLI GHTKVSGAKL SGGRREFVTK NCLMEEDVCM  420
FELIERNDIV LKVHIFRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	1e-18	B3 family protein