PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g097070.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 205aa    MW: 23702.7 Da    PI: 8.1859
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g097070.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57361.22.7e-192821698
            DUF573 16 LqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWgs 98
                       +G+i+f +k    ++ d ++fy+ ++k i+++vs+ q+ +K+ rLKkK+++++++   +g++p+fsk+h+qk f+lsk+ Wgs
  Pd.00g097070.m01  2 VKGIISFLKK---FSTFDGKKFYNWINKYIEADVSRGQIADKVCRLKKKYRNNEANrGPNGEDPVFSKPHEQKLFDLSKQAWGS 82
                      5788888333...346699********************************99988689***********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MVKGIISFLK KFSTFDGKKF YNWINKYIEA DVSRGQIADK VCRLKKKYRN NEANRGPNGE  60
DPVFSKPHEQ KLFDLSKQAW GSISCTTNRT NTNADINDGI VEEGANDAQK KATDVVDDAQ  120
KKATDDDILQ EKEVLFDDNL VMEAFDKYLT SRGLDLRWFG QDKLESLENK WRKIRVAEST  180
FRLLQAKFDA KVHQIALHAY NFFDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.13e-13GeBP family protein