PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g091780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 551aa MW: 61208.1 Da PI: 6.6368

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g091780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87	1.8e-27	308	362	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH++Fv+aveqL G ++A+P++ilelmk +gLt+++v+SHLQkYR++ Pd.00g091780.m01 308 KMKVDWTPELHKKFVQAVEQL-GVDQAIPSRILELMKAEGLTRHNVASHLQKYRMH 362 5689***************.******************************96 PP
2	Myb_DNA-binding	44.7	3e-14	311	360	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ Pd.00g091780.m01 311 VDWTPELHKKFVQAVEQLGVDqaIPSRILELMKaEGLTRHNVASHLQKYR 360 57***********************************************7 PP
3	Response_reg	29.1	5e-11	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl+ d++++ + +++ le +y +v+++ + +eal + + +++ ++ ++ ++ G+ +++ +++++ +lp i+ + +++ +++ Pd.00g091780.m01 20 VLLLDEDNSSAAEIKSKLEAMDY-IVTTFCNETEALSAFSSNPqsFQVAIVEVNASN--GHGVFQFLETAK-DLPTIMTSNIHCLSTMMKCIA 108 7999999**************.***********776666999999988765..666788888877.99999999***** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 +Ga +fl Kp ++++l++ Pd.00g091780.m01 109 LGAVEFLRKPLSEDKLRN 126 *************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MVCTANDLQE WKDFPKGLKV LLLDEDNSSA AEIKSKLEAM DYIVTTFCNE TEALSAFSSN 60 PQSFQVAIVE VNASNGHGVF QFLETAKDLP TIMTSNIHCL STMMKCIALG AVEFLRKPLS 120 EDKLRNIWQH VVHKAFNAGG SAISESLKPV KESVVSILQI KQETEEQKCK ISVETENVSR 180 VHESDREQSV GSDKYPAPST PQLKQGSRLL ADGDCQDQIN CLSEKESGEN DGESKSVETT 240 CGNPIDEGTV QMSEPQMTRK RVVKEENDSV NGSQHPHNRN SANDVGGAAE NLSKASAPNN 300 SCKSNRKKMK VDWTPELHKK FVQAVEQLGV DQAIPSRILE LMKAEGLTRH NVASHLQKYR 360 MHKRHILPKE DDRRLPHPRD PIQRSYYPQN QKPIMAFPPY HYNNSLSMAP VYPMWGQPGS 420 QPAGVQMWGS PGFPQWQPSE SWHWKPYQGM QADAWGCPVM PPLQGGYPSY PQNAAGFHAG 480 VVDNGCGMQH NSVDLHPAEE VVDKVVKEAI SKPWLPLPLG LKPPSTEGVL DELSRQGICN 540 IPPHINRSNT R

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MVCTANDLQE WKDFPKGLKV LLLDEDNSSA AEIKSKLEAM DYIVTTFCNE TEALSAFSSN  60
PQSFQVAIVE VNASNGHGVF QFLETAKDLP TIMTSNIHCL STMMKCIALG AVEFLRKPLS  120
EDKLRNIWQH VVHKAFNAGG SAISESLKPV KESVVSILQI KQETEEQKCK ISVETENVSR  180
VHESDREQSV GSDKYPAPST PQLKQGSRLL ADGDCQDQIN CLSEKESGEN DGESKSVETT  240
CGNPIDEGTV QMSEPQMTRK RVVKEENDSV NGSQHPHNRN SANDVGGAAE NLSKASAPNN  300
SCKSNRKKMK VDWTPELHKK FVQAVEQLGV DQAIPSRILE LMKAEGLTRH NVASHLQKYR  360
MHKRHILPKE DDRRLPHPRD PIQRSYYPQN QKPIMAFPPY HYNNSLSMAP VYPMWGQPGS  420
QPAGVQMWGS PGFPQWQPSE SWHWKPYQGM QADAWGCPVM PPLQGGYPSY PQNAAGFHAG  480
VVDNGCGMQH NSVDLHPAEE VVDKVVKEAI SKPWLPLPLG LKPPSTEGVL DELSRQGICN  540
IPPHINRSNT R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-146	ARR-B family protein