PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g088340.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 912aa MW: 101837 Da PI: 6.2604

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g088340.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92	4.5e-29	592	643	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek i+le+l+kyFs+++kdAA+++gvc T+LKriCRq+GIkRWP+Rkik++ Pd.00g088340.m01 592 AEKAITLEVLRKYFSGSLKDAANSIGVCSTTLKRICRQHGIKRWPSRKIKKV 643 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 912 aa Download sequence
MDDDVLSPAT MMGAQPDSAT DLDFMDELFL EGCWLETTDG PEFPNQSHAN SGAHLNPSVF 60 WHTLEANGNL TMNPSENSNQ EVIQTPFFKQ LHEGPVNPQF PSQNMIDVDG YSGHSADPTI 120 KSYELNRRWW IGPLGNQDPA SSVMERLMRA LVCIRDVMRD KNVLVQVWVP VNKGGRNVLT 180 TNDDLFSLDS SCPRLSKYRD ISVKYQFSTG EDSAELVKGL PGRVFSGQVP EWTPDVRFFR 240 SDEYPRVDYA QCYDVRGTVA LPIFEQGSRT CLGVIEVVTT TQKIKYQLEL ESVCKALEAV 300 DLQSSRNWST QNVKGCVKPY QAALPEIQEV LRSACETHKL PLAQTWVSCI QQGKDGCRHS 360 DDNYVHCVST VDHAFHVTDP YIEGFHEACS EHHLLKGQGI VGKAFMTNQP CFSDDITSCV 420 KTEYPLSHHA RMFGLHAAVA IRLRSMKTGS TDFVLEFFLP VECRDPEEQK KMLNSLSIII 480 QQICRSLRVV TDKELEEESD FPVSEMIVSS DPRPSGIASF TEVQLSGNDV SIFPMENPRE 540 VLGVKSSKLR QHQPDSNLKV GVKCGRECSA LGEGSFSSVG VSKTREKRRT RAEKAITLEV 600 LRKYFSGSLK DAANSIGVCS TTLKRICRQH GIKRWPSRKI KKVGHSLQKL QLVIDSVEGA 660 SGAFQINSFY TNFPELTSPN LPGTSPFSTS KLSDQPKPTN LSPEGGVVSP QATASKSPSS 720 SWSQSSSSSQ CCSSRTQQHR PTCNVTGDDD PIVGDNSGDG VLKRVRSEAE LHAFSQDRTQ 780 LLPRSQSHKI LNELQKLQPI PPSLKNNGVA EEGEVQRVKV AYGDEKTRFR MQHDWRYEDL 840 VQEIAKRFSI EDMSKFYIKY LDDDSEWILL TCDADLEECI DVCRSSQSNT IKLSLHLSRH 900 HLERFIGTGG PS

Sequence ? help Back to Top

Protein Sequence Length: 912 aa Download sequence

MDDDVLSPAT MMGAQPDSAT DLDFMDELFL EGCWLETTDG PEFPNQSHAN SGAHLNPSVF  60
WHTLEANGNL TMNPSENSNQ EVIQTPFFKQ LHEGPVNPQF PSQNMIDVDG YSGHSADPTI  120
KSYELNRRWW IGPLGNQDPA SSVMERLMRA LVCIRDVMRD KNVLVQVWVP VNKGGRNVLT  180
TNDDLFSLDS SCPRLSKYRD ISVKYQFSTG EDSAELVKGL PGRVFSGQVP EWTPDVRFFR  240
SDEYPRVDYA QCYDVRGTVA LPIFEQGSRT CLGVIEVVTT TQKIKYQLEL ESVCKALEAV  300
DLQSSRNWST QNVKGCVKPY QAALPEIQEV LRSACETHKL PLAQTWVSCI QQGKDGCRHS  360
DDNYVHCVST VDHAFHVTDP YIEGFHEACS EHHLLKGQGI VGKAFMTNQP CFSDDITSCV  420
KTEYPLSHHA RMFGLHAAVA IRLRSMKTGS TDFVLEFFLP VECRDPEEQK KMLNSLSIII  480
QQICRSLRVV TDKELEEESD FPVSEMIVSS DPRPSGIASF TEVQLSGNDV SIFPMENPRE  540
VLGVKSSKLR QHQPDSNLKV GVKCGRECSA LGEGSFSSVG VSKTREKRRT RAEKAITLEV  600
LRKYFSGSLK DAANSIGVCS TTLKRICRQH GIKRWPSRKI KKVGHSLQKL QLVIDSVEGA  660
SGAFQINSFY TNFPELTSPN LPGTSPFSTS KLSDQPKPTN LSPEGGVVSP QATASKSPSS  720
SWSQSSSSSQ CCSSRTQQHR PTCNVTGDDD PIVGDNSGDG VLKRVRSEAE LHAFSQDRTQ  780
LLPRSQSHKI LNELQKLQPI PPSLKNNGVA EEGEVQRVKV AYGDEKTRFR MQHDWRYEDL  840
VQEIAKRFSI EDMSKFYIKY LDDDSEWILL TCDADLEECI DVCRSSQSNT IKLSLHLSRH  900
HLERFIGTGG PS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein