PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g088190.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 663aa MW: 74240.1 Da PI: 7.7311

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g088190.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55	2.7e-17	62	136	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA+++GFs ++ +s++sk +g+++ r+fvC +eg ++++ ++ C+a+l+++++ ++kw+ tk+++eH+H+l+ Pd.00g088190.m01 62 FYDEYARRLGFSSKVGQSSRSKPDGTTIAREFVCGREGLKRRHADS--------------CDAMLRIELKGQDKWVSTKFVKEHSHALV 136 9************************************9998777..............*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MDVEVIDVEG MGHRGMADDG DAERSEGGEV NNAENSEAHD EDGISEPYVG MEFNSEEAAK 60 TFYDEYARRL GFSSKVGQSS RSKPDGTTIA REFVCGREGL KRRHADSCDA MLRIELKGQD 120 KWVSTKFVKE HSHALVSPGK VHYLRPRRHF AGAAKNVAET YQGVGIVPSG VMYVSVDGNR 180 TPVEKNRVVR NTLSAESNRP VKNATTLPMF FRQYERALEN SFEREIEADF DTICTTPVLR 240 TPSPMEKQAA NLYTRKFFAK FQEELVETFV YTANRIEGDG AISTFRVAKF EDDHKAYIVT 300 FNYPEMRANC SCQMFEYSGI LCRHVLTVFT VTNVLTLPSH YILKRWTRNA KSGTTLDERS 360 GELHGQDSLT LRYNNLCREA IKYAEDGATT TETFIAAMTA LRDGGKKVSV VKKNVAKVAP 420 PNSQVSVTSY DDRKNSTSMS DMTPLLWPRQ DEVMKRFNLN DAGAPAQTVS DLNLPRMAPV 480 SLHRDDGTPE NMVVLPCLKS MTWVMENKNS APGNRVAVIN LKLQDYSRTI STESEVKFQL 540 SRVSLEPMLR SMAYISDQLS TPANKVAVIN LKLQDAETTS GESEVKFQVS RDTLGAMLRS 600 MAYIREQLSS AAEIQSESVS KKPRNCYIYL CVALPSLCVL GHFIYNIHLH AVLEKKKKKN 660 LSG

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MDVEVIDVEG MGHRGMADDG DAERSEGGEV NNAENSEAHD EDGISEPYVG MEFNSEEAAK  60
TFYDEYARRL GFSSKVGQSS RSKPDGTTIA REFVCGREGL KRRHADSCDA MLRIELKGQD  120
KWVSTKFVKE HSHALVSPGK VHYLRPRRHF AGAAKNVAET YQGVGIVPSG VMYVSVDGNR  180
TPVEKNRVVR NTLSAESNRP VKNATTLPMF FRQYERALEN SFEREIEADF DTICTTPVLR  240
TPSPMEKQAA NLYTRKFFAK FQEELVETFV YTANRIEGDG AISTFRVAKF EDDHKAYIVT  300
FNYPEMRANC SCQMFEYSGI LCRHVLTVFT VTNVLTLPSH YILKRWTRNA KSGTTLDERS  360
GELHGQDSLT LRYNNLCREA IKYAEDGATT TETFIAAMTA LRDGGKKVSV VKKNVAKVAP  420
PNSQVSVTSY DDRKNSTSMS DMTPLLWPRQ DEVMKRFNLN DAGAPAQTVS DLNLPRMAPV  480
SLHRDDGTPE NMVVLPCLKS MTWVMENKNS APGNRVAVIN LKLQDYSRTI STESEVKFQL  540
SRVSLEPMLR SMAYISDQLS TPANKVAVIN LKLQDAETTS GESEVKFQVS RDTLGAMLRS  600
MAYIREQLSS AAEIQSESVS KKPRNCYIYL CVALPSLCVL GHFIYNIHLH AVLEKKKKKN  660
LSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein