PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g086110.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 318aa    MW: 35970.9 Da    PI: 4.4847
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g086110.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM28.73.8e-091710941128
               NAM  41 kvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmhe 125
                       ++eP+++ k++ +    ++++yf sk +k ++ ++  +r+ + g+W++t ++k v++k     + + +g k+ + + +  + +  +t W+++e
  Pd.00g086110.m01  17 NTEPSEIWKNYGGpqlVDTDLYFISKLKKLTP-KRMDRRIGNGGTWSETESSKLVHEKvsgnpNPNPIGRKRKFRYEN--KGSEDHTGWLLDE 106
                       56788886433222224557777777766554.5566668999************999877666667********984..334469******* PP

               NAM 126 yrl 128
                       y+l
  Pd.00g086110.m01 107 YSL 109
                       *97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MSLYNNFLHA CNLFGKNTEP SEIWKNYGGP QLVDTDLYFI SKLKKLTPKR MDRRIGNGGT  60
WSETESSKLV HEKVSGNPNP NPIGRKRKFR YENKGSEDHT GWLLDEYSLF DGPKNDYNQR  120
SYDFDFVICR MRKNDRVGIK ATNLKRGSQD KEEKKMTTNK KMKKDDQMGS TESSSLQGCS  180
SSPIGGDLVG FDPIDLTIFE ENTMADMEQL LGEAWSPSNF ENEENTMAGM EQLLGEAWSS  240
SNFEDAVSYD VDPIGKTQIN FENEENTMAN MEQLLGEAWS PSNFENVVSH DVDPIGETQS  300
SQLSNWSQAM LDQLLVGV