PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g083350.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 568aa MW: 62977.2 Da PI: 5.8687

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g083350.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.8	2.2e-14	31	121	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 ffkv+ s++l lp kfa + ++ +++ +led+ g +Wev + ++ g+ l++GW+ F +++Lk g+f++F ++ +s f Pd.00g083350.m01 31 FFKVM--IGDRFSKLLFLPPKFAPTVsALV---NQKAVLEDSLGLQWEVII--SRINGSLSLKQGWNAFSLDHDLKIGEFLIFNYITSSHF-- 114 77777..444555679*****9996555...347***********..9999999**********************98999.. PP EEEEE-S CS B3 93 vvkvfrk 99 vk+++k Pd.00g083350.m01 115 IVKIYDK 121 *9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MDGKVACVEC TQKCLLDHGN KKKASPDVAS FFKVMIGDRF SKLLFLPPKF APTVSALVNQ 60 KAVLEDSLGL QWEVIISRIN GSLSLKQGWN AFSLDHDLKI GEFLIFNYIT SSHFIVKIYD 120 KSGCEKLNFP EAINQKKRTR DNRKYTFKAG PSQTIDRSSM NKRDSRTSVV YGSDADIGHH 180 LHETNDTGKA LIVTENDSTR DNSHERSRLN PKEAYIEEMI CMFDRDVGDK QEEDRTYIFD 240 LSDFEMLKKN SGTGGSNEVT AMDETCTDHD DSLLGLINEA GSVDKSPVAK EAVTAAISLD 300 ASKFDGSQIN NPSETKVQNT ASPSHEGLCI CKTSGHLFPK AALKPEENEN ISNISNRAIN 360 KCPTADRSES LSGNEVVISG KEHDLIDDSC QSANKKISEI SEPFDKMMKA IKIESVELTS 420 DPSSQKIIPQ INGESVKVVN PVGSKISNMI RTENDSAVPV VKSEPVDPVI TLPISSSFSC 480 QELPMSLPIR MTYRGRPKTD RRVVYLRDPV MRLWPVLYIE RNYFKTLASG WEAFSKANNI 540 QPGDECVIGV ENGVEGICSV QIISKREI

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MDGKVACVEC TQKCLLDHGN KKKASPDVAS FFKVMIGDRF SKLLFLPPKF APTVSALVNQ  60
KAVLEDSLGL QWEVIISRIN GSLSLKQGWN AFSLDHDLKI GEFLIFNYIT SSHFIVKIYD  120
KSGCEKLNFP EAINQKKRTR DNRKYTFKAG PSQTIDRSSM NKRDSRTSVV YGSDADIGHH  180
LHETNDTGKA LIVTENDSTR DNSHERSRLN PKEAYIEEMI CMFDRDVGDK QEEDRTYIFD  240
LSDFEMLKKN SGTGGSNEVT AMDETCTDHD DSLLGLINEA GSVDKSPVAK EAVTAAISLD  300
ASKFDGSQIN NPSETKVQNT ASPSHEGLCI CKTSGHLFPK AALKPEENEN ISNISNRAIN  360
KCPTADRSES LSGNEVVISG KEHDLIDDSC QSANKKISEI SEPFDKMMKA IKIESVELTS  420
DPSSQKIIPQ INGESVKVVN PVGSKISNMI RTENDSAVPV VKSEPVDPVI TLPISSSFSC  480
QELPMSLPIR MTYRGRPKTD RRVVYLRDPV MRLWPVLYIE RNYFKTLASG WEAFSKANNI  540
QPGDECVIGV ENGVEGICSV QIISKREI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18960.1	1e-11	B3 family protein