PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g081370.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 532aa    MW: 57927.2 Da    PI: 9.473
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g081370.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix96.62.2e-3070154187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW++qe+laL+++r+em+ ++r++ lk+plWe+vs+k+ e g++rs+k+Ckek+en++k+yk++keg+ +r++++s  +++f++lea
  Pd.00g081370.m01  70 RWPRQETLALLKIRSEMDVSFRDATLKGPLWEDVSRKLVELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YKFFSELEA 154
                       8*********************************************************************866665..******985 PP
2trihelix107.96.6e-34338423187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW+k evlaLi++r+ +e+r++++  k+plWee+s+ m + g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf++l+a
  Pd.00g081370.m01 338 RWPKAEVLALIKLRSGLESRYQEAGPKGPLWEEISAGMGRMGYKRSSKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFHELDA 423
                       8*********************************************************************8.99999********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    
MAAAAAEAGD QAQLVEAASP ISSRPPASAS VNLDELMTLS GAAAAAEDAL AASRDEADRG  60
GGDVGSSGNR WPRQETLALL KIRSEMDVSF RDATLKGPLW EDVSRKLVEL GYKRSAKKCK  120
EKFENVHKYY KRTKEGRAGR QDGKSYKFFS ELEALHGTAA ATSSVNVSAS PAVHVTHASP  180
NPVSIGFSNP MPISSFRMSP TIPVMQKQET MQQRFLEVIE KREQDRTIRE EAWKRQEMAR  240
LTREHELMSQ ERAISASRDA AIISFLQKIT GQTIQLPPPV NVHVAPPPPV PPSVPVVTPL  300
AQQSVVMAVP EQQVQPPQEN IASGGGAGGS LEPASSSRWP KAEVLALIKL RSGLESRYQE  360
AGPKGPLWEE ISAGMGRMGY KRSSKRCKEK WENINKYFKK VKESNKKRPE DAKTCPYFHE  420
LDALYRKRIL GGGGGGGSSS SLGTQNRLEQ PQQQQLQLEN PKSDSATQPQ DRSLEAQPSV  480
PVMPQTQEAV VATAQSEDKN GDHSTNVETS NVGLRANLFG EATDEAAKKK TL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113121KRSAKKCKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.12e-66Trihelix family protein