PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g070630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SRS

Protein Properties

Length: 1177aa MW: 130708 Da PI: 7.8132

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g070630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	24.6	7.2e-08	56	90	5	39
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv 39 + +C++CGn a+ C +e C+ CC C+ hv Pd.00g070630.m01 56 KPKCKQCGNVARSRCPYESCKSCCSKAQNPCHIHV 90 569*******************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1177 aa Download sequence
MAATAPSPSP ALSSTSSGAT PSTAATTATA AVPAVVPFQT VHRTDTPPKT LRGLNKPKCK 60 QCGNVARSRC PYESCKSCCS KAQNPCHIHV LKSNATFPDK APTSSSPLFD HQSIEASPSG 120 NSHRVASLRQ LSNNFAQFNN VHLPLRSRKP LTKKDAVAIN EWRFSKLKEY KDRNIEVENE 180 AFDRYMRNVT LLEEVFSVKS IMEESIGDEA ELKSISTDNS TTATTEEDTE AMVSGLKLKL 240 RSNPMRTNNF RKRIQQVVDE GLKKLKKREL DDGEKEPIVG TGLDPGPKEG EKWRAERASA 300 LGDLIDKLNK ARNEEDLKLC LEMKSQLFRE HKLTSTSESE EKQATKNDLE PRKESNYSFP 360 KVVSTTEIDQ ETLNIVYTHF SSLEHIQGTS EKSPSHPDYL PPGRRHRMPE MVKIWPVLTT 420 VSCTRLRVSA EIDDFGGDCP GHFRCASLSK EFRFGCQFRV NRVARLQVVF LFDFWASEFW 480 VWMAKFFKVE AKEFRFKVDD LSLGGSILIT ERVRERRFHV SLELKCVEWV VRQLKELLDY 540 KELSFFRQFK GDSYQVWVEK LHNRMGSHMR LTKCVHGVVK SVVIPQGRNN FGWALMKANL 600 EVFMDGSNTP NCITSSANFD CTFPRSNDRV CGKSYKEAVE VEFGPDRRGT DSNTVRNDVE 660 PQVTDEVCGL PWKRVVVCER QVVHQSWSVV ADALSGWLQK EVKVFHFQNN RAFFVCDNIE 720 EAQWCARVGK ITTDGSGDLL MYSWKQSLGN NSRKVVSYGG WIAISGLPLH WWSLNFFSRI 780 GEACGGLVEV DSRTSNFRYL IDAKIRVRTN EIGFLPGELR IVDNGEVHVV QFRPLSPAIR 840 PHHNPLSHLV ERGRGPTATS DRFQTASNHR SDKVGEARGI KRGGVGNQSV FQLGKGKAAE 900 VEGYREVGIN LQIGNRDKED ALKRGQNEVT RVLTHVEAGG PSIARRDVGL SAGPNLVTGL 960 SSNGGEAGDT LVDGPNYLGS IRVQPAEGAL LGPIVTEGSS RERAATSDLG DNARPRSLDN 1020 VVLPTGSNSR SKGDKAFFLK YGDSSDGGRY RYRGGSQLRI EPVESGGDAM AGSFNSRVGG 1080 EGESFCPDSV DTEGEEMSAS ESSESIDMSS EDERERLDVF EKDPGLLADF FADIPTPLGD 1140 PSKEHEASSK GVGTMLAESI KEPKLKEIFS KGTGGRS

Sequence ? help Back to Top

Protein Sequence Length: 1177 aa Download sequence

MAATAPSPSP ALSSTSSGAT PSTAATTATA AVPAVVPFQT VHRTDTPPKT LRGLNKPKCK  60
QCGNVARSRC PYESCKSCCS KAQNPCHIHV LKSNATFPDK APTSSSPLFD HQSIEASPSG  120
NSHRVASLRQ LSNNFAQFNN VHLPLRSRKP LTKKDAVAIN EWRFSKLKEY KDRNIEVENE  180
AFDRYMRNVT LLEEVFSVKS IMEESIGDEA ELKSISTDNS TTATTEEDTE AMVSGLKLKL  240
RSNPMRTNNF RKRIQQVVDE GLKKLKKREL DDGEKEPIVG TGLDPGPKEG EKWRAERASA  300
LGDLIDKLNK ARNEEDLKLC LEMKSQLFRE HKLTSTSESE EKQATKNDLE PRKESNYSFP  360
KVVSTTEIDQ ETLNIVYTHF SSLEHIQGTS EKSPSHPDYL PPGRRHRMPE MVKIWPVLTT  420
VSCTRLRVSA EIDDFGGDCP GHFRCASLSK EFRFGCQFRV NRVARLQVVF LFDFWASEFW  480
VWMAKFFKVE AKEFRFKVDD LSLGGSILIT ERVRERRFHV SLELKCVEWV VRQLKELLDY  540
KELSFFRQFK GDSYQVWVEK LHNRMGSHMR LTKCVHGVVK SVVIPQGRNN FGWALMKANL  600
EVFMDGSNTP NCITSSANFD CTFPRSNDRV CGKSYKEAVE VEFGPDRRGT DSNTVRNDVE  660
PQVTDEVCGL PWKRVVVCER QVVHQSWSVV ADALSGWLQK EVKVFHFQNN RAFFVCDNIE  720
EAQWCARVGK ITTDGSGDLL MYSWKQSLGN NSRKVVSYGG WIAISGLPLH WWSLNFFSRI  780
GEACGGLVEV DSRTSNFRYL IDAKIRVRTN EIGFLPGELR IVDNGEVHVV QFRPLSPAIR  840
PHHNPLSHLV ERGRGPTATS DRFQTASNHR SDKVGEARGI KRGGVGNQSV FQLGKGKAAE  900
VEGYREVGIN LQIGNRDKED ALKRGQNEVT RVLTHVEAGG PSIARRDVGL SAGPNLVTGL  960
SSNGGEAGDT LVDGPNYLGS IRVQPAEGAL LGPIVTEGSS RERAATSDLG DNARPRSLDN  1020
VVLPTGSNSR SKGDKAFFLK YGDSSDGGRY RYRGGSQLRI EPVESGGDAM AGSFNSRVGG  1080
EGESFCPDSV DTEGEEMSAS ESSESIDMSS EDERERLDVF EKDPGLLADF FADIPTPLGD  1140
PSKEHEASSK GVGTMLAESI KEPKLKEIFS KGTGGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32730.1	8e-94	SRS family protein