PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g068140.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 978aa MW: 108880 Da PI: 9.1719

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g068140.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.2	2.1e-06	65	121	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +eL++ g+t +qV+ +F +R + +k Pd.00g068140.m01 65 KRPRDLLNPKAIKYMQSVFSIKDAISKKESRELSALFGVTGTQVRDFFNSQRSRVRK 121 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 978 aa Download sequence
MEDLSEMEIG SSVESFQKFL DSQRQLFHSQ IDQLQKVVVT QCNLTGVNPL SQEMAAGALS 60 VKIGKRPRDL LNPKAIKYMQ SVFSIKDAIS KKESRELSAL FGVTGTQVRD FFNSQRSRVR 120 KLVQLSREKA TRSSEHKELQ DGVSTSSDPL TPIDLVPLNS VGPNSVEDAP SCSTQDDALS 180 GLDDLDKHFV DNIFNLMRKE EMFSGQVKLM EWILQIQNSS VLCWFLNTGG VMILATWLSQ 240 AAIEEQTSVL LVILKVLCHL PLHKALPVHM SAILQSVNRL RFYRTADVSK RARVLLSRWS 300 KLLARIQNMK KPNGMKTSSD SQHELVMLKQ SIDEVMGDES WKSNIDIPED IFATPFENAE 360 NSRRSEASEP LKLLTASSDE SNKKQILGVS SSQFRARRKV QLVEQPGQKS AGRSVQVTRA 420 TPVSKGRPMS ADDIQKAKMR AQFMQSKYGK SGSSNENKEL KTEGGNKLST SQDSILPVVP 480 KVPVRPDIEE PKKPVTLLLK ERESPNRVET SLAPKLRMDL KESILEKCQR IRVPWKTPPE 540 IKLDPEWRVG GGENGKEIEV QRNRNRREKE TIYQRVQEIP SNPKEPWDIE MDYDDSLTPE 600 IPIEQPPDAD GTETQASLSR EGNNAQAWVT SSQGVNSAAS LAPALSQMNG ASAAAEPDLE 660 LLAVLLKNPE LVFALTSGQA ANLSSEDTVK LLDMIKSGGA GNLNGLGRKM EQRVEVSLPS 720 PTPSSNPGTS GWRADAGRNA FPQQMATTNN SLLSSAVHMI PSQRLSTSQP AVPSYSPDYF 780 PPSMQTPAAS EMVLTMKNTH LNNLSNSYNV AERQPNSFPP PFVSTPARQQ RQPQPLQQPR 840 FSETRLPTHM YPSKPQMGKP GPPPPPSDSW RARQDVPSNY RYLENQNQYN ASYGGPSQQP 900 QLLPGPSWEG NEHVGGNQDF ESWSPDNSPT RNPGYMYGRE PRMNPARDYM PDRSRQMNPS 960 GYGGQNRLGN RWPDRGRQ

Sequence ? help Back to Top

Protein Sequence Length: 978 aa Download sequence

MEDLSEMEIG SSVESFQKFL DSQRQLFHSQ IDQLQKVVVT QCNLTGVNPL SQEMAAGALS  60
VKIGKRPRDL LNPKAIKYMQ SVFSIKDAIS KKESRELSAL FGVTGTQVRD FFNSQRSRVR  120
KLVQLSREKA TRSSEHKELQ DGVSTSSDPL TPIDLVPLNS VGPNSVEDAP SCSTQDDALS  180
GLDDLDKHFV DNIFNLMRKE EMFSGQVKLM EWILQIQNSS VLCWFLNTGG VMILATWLSQ  240
AAIEEQTSVL LVILKVLCHL PLHKALPVHM SAILQSVNRL RFYRTADVSK RARVLLSRWS  300
KLLARIQNMK KPNGMKTSSD SQHELVMLKQ SIDEVMGDES WKSNIDIPED IFATPFENAE  360
NSRRSEASEP LKLLTASSDE SNKKQILGVS SSQFRARRKV QLVEQPGQKS AGRSVQVTRA  420
TPVSKGRPMS ADDIQKAKMR AQFMQSKYGK SGSSNENKEL KTEGGNKLST SQDSILPVVP  480
KVPVRPDIEE PKKPVTLLLK ERESPNRVET SLAPKLRMDL KESILEKCQR IRVPWKTPPE  540
IKLDPEWRVG GGENGKEIEV QRNRNRREKE TIYQRVQEIP SNPKEPWDIE MDYDDSLTPE  600
IPIEQPPDAD GTETQASLSR EGNNAQAWVT SSQGVNSAAS LAPALSQMNG ASAAAEPDLE  660
LLAVLLKNPE LVFALTSGQA ANLSSEDTVK LLDMIKSGGA GNLNGLGRKM EQRVEVSLPS  720
PTPSSNPGTS GWRADAGRNA FPQQMATTNN SLLSSAVHMI PSQRLSTSQP AVPSYSPDYF  780
PPSMQTPAAS EMVLTMKNTH LNNLSNSYNV AERQPNSFPP PFVSTPARQQ RQPQPLQQPR  840
FSETRLPTHM YPSKPQMGKP GPPPPPSDSW RARQDVPSNY RYLENQNQYN ASYGGPSQQP  900
QLLPGPSWEG NEHVGGNQDF ESWSPDNSPT RNPGYMYGRE PRMNPARDYM PDRSRQMNPS  960
GYGGQNRLGN RWPDRGRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein