PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g062990.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 250aa MW: 27976 Da PI: 8.8036 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 74.4 | 1.3e-23 | 126 | 227 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae++ + +++ ++l+ +d++ W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F + Pd.00g062990.m01 126 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QELMAKDLHDSAWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--R 214 99*****************************954.5444.48************************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++ +l+++++r+ Pd.00g062990.m01 215 DEKSQLLLGIRRA 227 567778**99997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MKAPTNGFLA TSGEGEQKRI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE 60 TDFIPNYPNL PSKLICMLHN VTLHADTETD EVYAQMTLQP VNKYEKEAIL ASDIGLKQSR 120 QPSEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQELMAKD LHDSAWTFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQL LLGIRRANRQ QPALSSSVMS 240 RQALLSLWYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19220.1 | 1e-142 | ARF family protein |