PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g060820.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 271aa    MW: 30198.9 Da    PI: 4.2344
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g060820.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26035.52.8e-1136044101
            DUF260  44 kllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101
                       ++l+ lp +er  a  ++++eA+ar+ dP+yGa++ il+lq+q+ + +a+l++++e+l
  Pd.00g060820.m01   3 SILSMLPMSERAVASWTMTFEAHARVVDPIYGATSYILDLQEQVLNIQAQLDEAHEQL 60 
                       67889999*********************************************99985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MSSILSMLPM SERAVASWTM TFEAHARVVD PIYGATSYIL DLQEQVLNIQ AQLDEAHEQL  60
ACAIAPVVDP NQDLENSIEQ SEVANPTEQA AVAKPTEFES LPQFSFTHTN NVYNENMNLN  120
YHVSGSYKNS VNIPTKNVAD GWVNNEGTSS MSFFDMEWSF EDVDELLVDP CCTRRNKLEH  180
GTTATILYES ALLKRSRILV LDEATASMDN ATDYILQKTI RTEFADCTVI TVAHRIPTVM  240
DCTKVLAISD GKQALDYNPS SCTKNFVVSF M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.16e-14LBD family protein