PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g060440.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 491aa MW: 53435.1 Da PI: 8.3309 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 49.6 | 1e-15 | 105 | 197 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm........rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +W++ + +L+ea +e+ ++l+rg+l++ +Weev++ + + ++ +qCk+k++nl+kryk + ++ + s++ +f++l Pd.00g060440.m01 105 EWSDTAIACLLEAFTEKFNQLNRGNLRGRDWEEVAEMVsercgtagGNKSTYKTVEQCKNKIDNLKKRYKVELQRITSS-GLGASHWHWFKKL 196 5*************************************999999988888899*****************999998884.788889*****99 PP trihelix 86 e 86 e Pd.00g060440.m01 197 E 197 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 491 aa Download sequence |
MASSDDFPLI DSSSHLHAPP RPRDTVDSTT TANNGDFFPR PFPDDLDRSP NQTRTPNTKR 60 SSYYYKKLKP SSANPNPTTS TTEAESSSGQ ETASQRGDYR KDREEWSDTA IACLLEAFTE 120 KFNQLNRGNL RGRDWEEVAE MVSERCGTAG GNKSTYKTVE QCKNKIDNLK KRYKVELQRI 180 TSSGLGASHW HWFKKLEVIL GSSLVPKGGG GSDEERSGGR ANSNVAKQPK RYTPGSTGFT 240 NNLKSKSMPN VKWKRVMLKI SGAALAGDCQ SIDPKVATQI AEEVARACRL GVEVAIVVGG 300 CNFFCGDTWV SSTGLDRSTA YQIGMMATVM NSILLQSALE KVGVQARVQT ALTMPEVSEP 360 YNRLRAIRHL EKGRVVIFGG IGAGTGNYLF TTDIAAALRA SELNAEAVLK GTNFNGIYEC 420 HSGSNSVTVD HTCYREVVSR GITSVDIMAL TYCEENGIPV VIFNLLEPGN ISRALCGDQV 480 GTLIDQAGRI G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10030.1 | 1e-175 | Trihelix family protein |