PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g055150.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 302aa    MW: 33372.8 Da    PI: 7.0579
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g055150.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.79.2e-18181279195
                       EEEE-..-HHHHT.T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlks.grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k lt sd++ + +rlv+pkk+ae+h  ++++++++ + ++d +gr W+++++ +++s++   yvl+ G k++   n+ ++gD+v+F++++ 
  Pd.00g055150.m01 181 FEKSLTASDTFLNtARLVIPKKCAEAHfpKISETQGFPIAIQDYTGRDWKFQYRCWQNSNSkkmYVLE-GLKDYMILNQWQVGDTVTFHRTE- 271
                       899******998779**************99999*******************885555555548888.********************654. PP

                       SEE..EEE CS
                B3  88 sefelvvk 95 
                       +e++l ++
  Pd.00g055150.m01 272 QEGKLIIG 279
                       67767766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MASEHCFFCK AEIAEFITGW PLKDGSFAKL CGKCGYAYIH DQFCETFHSK SDGWRHCDGC  60
KKRLHCGCIM SCHTYTELDY GGVGCSKCLL RSKKSMESAA NEGTYLTTLS DSDTHSVVSN  120
EIIAECCSPG SSKGKASAHI GENSNVDSSG HTGCEGVESE TPPVDASTQN HLSNIDAIPL  180
FEKSLTASDT FLNTARLVIP KKCAEAHFPK ISETQGFPIA IQDYTGRDWK FQYRCWQNSN  240
SKKMYVLEGL KDYMILNQWQ VGDTVTFHRT EQEGKLIIGT KKTPASIASV QALKEKIWKL  300
LG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.11e-35B3 family protein