PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g051630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 296aa    MW: 34150.1 Da    PI: 4.3727
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g051630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.27.7e-2461371128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknra...tksgyW 83 
                       +p+G+rF P++eel+ +yL +kv+g++ +   v++++d+y + ePw++ +    +  +  +++++y F++ +kk+++g+r  r+   +++g+W
  Pd.00g051630.m01   6 VPVGYRFTPSEEELLLHYLLPKVNGNDYPK-GVVPDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTvgaASTGVW 95 
                       599************************999.99*******9879****7423322..24355688******************6333559*** PP

               NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       k   + k++ +  g+++g++k + + +  +p+    +W+m e++l
  Pd.00g051630.m01  96 KGEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137
                       **********9.999***********655555..89*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MAGYQVPVGY RFTPSEEELL LHYLLPKVNG NDYPKGVVPD CDLYGTKEPW EIWRDFHHSS  60
PDDQEDIYVF TTLKKKTPNG SRFCRTVGAA STGVWKGEDS GKKIRACGND IGIRKRFRYM  120
NPGSPHDDRW IMLEFQLDES LVRVRNKETI VLCLVRKKET SGKSKLEERQ TDHEVDMPSC  180
VEIQVQHVHD DQQQYIDPST YDQLRFLDDY LMNDVEGEQN TMVNPSLLAQ YDQQDMIGTS  240
TEDQLKVLED FLMNDVEGEQ DTMVNPALLA QYGQQGTSIE DQLRLFEDYL MSDIEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.13e-21NAC family protein