PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g046370.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NF-YA

Protein Properties

Length: 582aa MW: 62759.9 Da PI: 6.7952

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g046370.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	95.4	6.6e-30	154	209	2	58
CBFB_NFYA 2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 p+YVNaKQy++I++RRq+Rak+ e++ ++ rkpy+heSRh hA+rRpRg+gGrF Pd.00g046370.m01 154 GPIYVNAKQYHGIIRRRQSRAKAVMENRA-AALRKPYMHESRHLHAMRRPRGCGGRF 209 69*************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MAMQTVYFKE HEGITNPMGQ LSSALSGPWW SAFGSQPSYG ESCGQSKPFT MEHPSSGDQL 60 TATKLTGRGT EQGLDKGNTN QFTIFPGDGQ KSQAAISLQS SPQKYRARFE LGFSQPMICA 120 KYPYMDQCYG LFSTYGPQIS GRIMLPLNLT ADEGPIYVNA KQYHGIIRRR QSRAKAVMEN 180 RAAALRKPYM HESRHLHAMR RPRGCGGRFL NTKTMNNGKN GTEGTQVGDG QLFRHSGSHS 240 SELLQSESGT LNSSKETNGS SSNISGSEVT SVCSRRDLDC FSINHLSPSV HSLSGMMDSA 300 RGLPAPIWLL SKATHSWLIE EEPKVASYND AGRLYVGNLP YSLTSTQLAE VFGEAGTVVF 360 SEIIYDRVTD RSRGFGFVTM STVEEAQQAI RMFDGSQVGG RNVKVNFPEV PKGGEREILG 420 PKSIRSGFKV YIDSPHKIYA GNLGWGLTSQ GLKDAFEGQP GLLGAKVIYE RGSGRSRGFG 480 FVTFETNEAA VAAVAAMNEV EVDGRPLRLN MAAERARTVS VSSSPASEAT AQDTDSSEVV 540 SPPASETTAE NTDSSELVSP PASETTTEDA GSSELVSSSV SV

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MAMQTVYFKE HEGITNPMGQ LSSALSGPWW SAFGSQPSYG ESCGQSKPFT MEHPSSGDQL  60
TATKLTGRGT EQGLDKGNTN QFTIFPGDGQ KSQAAISLQS SPQKYRARFE LGFSQPMICA  120
KYPYMDQCYG LFSTYGPQIS GRIMLPLNLT ADEGPIYVNA KQYHGIIRRR QSRAKAVMEN  180
RAAALRKPYM HESRHLHAMR RPRGCGGRFL NTKTMNNGKN GTEGTQVGDG QLFRHSGSHS  240
SELLQSESGT LNSSKETNGS SSNISGSEVT SVCSRRDLDC FSINHLSPSV HSLSGMMDSA  300
RGLPAPIWLL SKATHSWLIE EEPKVASYND AGRLYVGNLP YSLTSTQLAE VFGEAGTVVF  360
SEIIYDRVTD RSRGFGFVTM STVEEAQQAI RMFDGSQVGG RNVKVNFPEV PKGGEREILG  420
PKSIRSGFKV YIDSPHKIYA GNLGWGLTSQ GLKDAFEGQP GLLGAKVIYE RGSGRSRGFG  480
FVTFETNEAA VAAVAAMNEV EVDGRPLRLN MAAERARTVS VSSSPASEAT AQDTDSSEVV  540
SPPASETTAE NTDSSELVSP PASETTTEDA GSSELVSSSV SV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06510.2	9e-56	NF-YA family protein