PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g046300.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 255aa    MW: 27735.4 Da    PI: 8.471
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g046300.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof113.21.1e-351772661
            zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                       +cprC  +ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ 
  Pd.00g046300.m01 17 PNCPRCGCSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 72
                      58***************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MERAGWKPND DHHQITPNCP RCGCSNTKFC YYNNYSLTQP RYFCKGCRRY WTKGGSLRNV  60
PVGGGCRKNR RGSKSLRLST TATATEGHVH QSSKSATNLG SYGSTVHNSY GTNVIMNNSL  120
GNSTSSSVSQ DGSSIDLALV YANFLNQKPD DSNSTGSDHQ LPELPSEFDP AALDFSSMAL  180
NMNNASSGGN ISSIQLMEDH QNGLVGSLGC HTENCSTNDL MSRGGIVVYF SNDGSYKSYY  240
ASCCYTTTRR RARSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-43Dof family protein