PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g040340.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 701aa MW: 79154.5 Da PI: 6.1874

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g040340.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.3	5.7e-14	100	174	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y+++vGFs+ + + +++k +g i++ +f Cs+e +++++ ++ C+a+l+++++ + w+ tk+++eHnH+++ Pd.00g040340.m01 100 LYDAYSRHVGFSTHVGQFSRTKPDGPIVTWDFACSREVFKRKNVES--------------CNAMLRIERKGANSWVATKFVEEHNHSMV 174 69************************************999877..............************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MQHLKSFSNC VMIMSCQKWV LVNNHLHLGF WIEKTVMDTE VVVDVEGENM EHHMEENTEP 60 GEKQNVNQNF AGREMSIQDD GNTKPHVGME FESEEAAKTL YDAYSRHVGF STHVGQFSRT 120 KPDGPIVTWD FACSREVFKR KNVESCNAML RIERKGANSW VATKFVEEHN HSMVSPSKVH 180 YLRPRRHFAG ATKNAAETLD ATTDVYFATE GNVSYEPNRG GQERLAHTYL AHPSLYGELY 240 SCINFSETIE DFESSWASLL ERYDLLRNDW LQAVYNARKQ WAPVYFRGTF FAAIFSNQGV 300 SSFFDGYVNQ QTSIPLFFKQ YERALELSLE KEIEADYDTM CTTPVLKTPS PMEQQAANLY 360 TKKVFAKFQE ELVETFVYTA NKIEGDGLVS KYRVAKYEHD DKAYIVTLNV SEMKASCSCQ 420 MFEYSGILCR HILTVFTVTN VLTLPPHYIL KRWTRNAKSG VGLDEQSSEN QGIETLNMRF 480 NNLCREAIKY AEEGAIAVET YNAAMSALQE GGKKISVVKK NVAKVTPPSS QPSGNIQEDN 540 MKKSPLPLGE MAPSLWPWQE ALPHRFNLND GGVPVADLNQ PSMAPVSIHP DGAHPDNTVV 600 LTCFKSMAWI IENKNSTSAG KVAVINLKLQ DYGKNPAGET EVQFRLTRVT LEPMLRSMAY 660 ISQQLSAPAN RVAVINLKLQ DTKTTSGETE VNYDKSSFIL I

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MQHLKSFSNC VMIMSCQKWV LVNNHLHLGF WIEKTVMDTE VVVDVEGENM EHHMEENTEP  60
GEKQNVNQNF AGREMSIQDD GNTKPHVGME FESEEAAKTL YDAYSRHVGF STHVGQFSRT  120
KPDGPIVTWD FACSREVFKR KNVESCNAML RIERKGANSW VATKFVEEHN HSMVSPSKVH  180
YLRPRRHFAG ATKNAAETLD ATTDVYFATE GNVSYEPNRG GQERLAHTYL AHPSLYGELY  240
SCINFSETIE DFESSWASLL ERYDLLRNDW LQAVYNARKQ WAPVYFRGTF FAAIFSNQGV  300
SSFFDGYVNQ QTSIPLFFKQ YERALELSLE KEIEADYDTM CTTPVLKTPS PMEQQAANLY  360
TKKVFAKFQE ELVETFVYTA NKIEGDGLVS KYRVAKYEHD DKAYIVTLNV SEMKASCSCQ  420
MFEYSGILCR HILTVFTVTN VLTLPPHYIL KRWTRNAKSG VGLDEQSSEN QGIETLNMRF  480
NNLCREAIKY AEEGAIAVET YNAAMSALQE GGKKISVVKK NVAKVTPPSS QPSGNIQEDN  540
MKKSPLPLGE MAPSLWPWQE ALPHRFNLND GGVPVADLNQ PSMAPVSIHP DGAHPDNTVV  600
LTCFKSMAWI IENKNSTSAG KVAVINLKLQ DYGKNPAGET EVQFRLTRVT LEPMLRSMAY  660
ISQQLSAPAN RVAVINLKLQ DTKTTSGETE VNYDKSSFIL I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein