PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g036540.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 308aa MW: 34535.1 Da PI: 6.1038

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g036540.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	26.5	1.6e-08	7	56	8	55
AP2 8 wdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +++++gr++A+++d ++n ++k+ + g ++ +e Aa+a++ a++k++g Pd.00g036540.m01 7 RHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEEAAARAYDLAALKYWG 56 699*********99998898888888******************98 PP
2	AP2	51.5	2.4e-16	99	150	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g Pd.00g036540.m01 99 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 150 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MLNISLRHRW TGRYEAHLWD KNCWNESQNK KGRQGAYDDE EAAARAYDLA ALKYWGQDTI 60 LNFPLDTYPE ELKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV 120 FGNKYLYLGT YATQEEAATA YDMAAIEYRG LNAVTNFDLS RYIKSLCPNN QNVPNNPQPK 180 PNGDLGPTQN PNSKLGLGFI PNYHSSSSST SESTVALPRP GNGASASSAL GLLLQSPKFK 240 EMLERTSTSS TDCSSTLSEP DIPRRSFPDD IQTYFDCQDL NSYAEGDDII FGDLHSFASP 300 VFHCELDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79700.2	3e-83	AP2 family protein