PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g035400.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Trihelix

Protein Properties

Length: 382aa MW: 43948.1 Da PI: 6.2529

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g035400.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	88	1.1e-27	72	153	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rrem+ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk k+++++ s +++y++++e Pd.00g035400.m01 72 WVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGS---GSAKMSYYKEIE 153 ******************************************************************84...556899*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MYLSEKPRAI DFYKEEGSRD MMIEVVSNDD LSQSQTHHPN HQPQQQQQQM LLGDSSGEDH 60 EVKAPKKRAE TWVQDETRSL IALRREMDGL FNTSKSNKHL WEQISAKMRE KGFDRSPTMC 120 TDKWRNLLKE FKKAKHHDRG SGSAKMSYYK EIEEILKERN KNAQYKSPAP PKVDSFMQFS 180 DKGIEDASIS FAPVEASGRP TLNLERRLDH DGHPLAITAA DAVTASGVPP WNWRETPGNG 240 GEGQSCGRVI LVTWEVTNYT RRIGIDGSAD AIKEAIKSAF RLRTKRAFWL EDEDQIVRSL 300 DRDMPLGNYT LHLDEGVAIK VCLYDESDHI PVHTEEKIFY TEDDYRDFLT RRGWSCLREF 360 DGYRNIENMD DLRPGAIYRG VS

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MYLSEKPRAI DFYKEEGSRD MMIEVVSNDD LSQSQTHHPN HQPQQQQQQM LLGDSSGEDH  60
EVKAPKKRAE TWVQDETRSL IALRREMDGL FNTSKSNKHL WEQISAKMRE KGFDRSPTMC  120
TDKWRNLLKE FKKAKHHDRG SGSAKMSYYK EIEEILKERN KNAQYKSPAP PKVDSFMQFS  180
DKGIEDASIS FAPVEASGRP TLNLERRLDH DGHPLAITAA DAVTASGVPP WNWRETPGNG  240
GEGQSCGRVI LVTWEVTNYT RRIGIDGSAD AIKEAIKSAF RLRTKRAFWL EDEDQIVRSL  300
DRDMPLGNYT LHLDEGVAIK VCLYDESDHI PVHTEEKIFY TEDDYRDFLT RRGWSCLREF  360
DGYRNIENMD DLRPGAIYRG VS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein