PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g029190.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SRS
Protein Properties Length: 150aa    MW: 15505.1 Da    PI: 4.1404
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g029190.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70288.51.5e-2786696154
            DUF702  96 skkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                        +k le  ++P+evss+avfrcvrvss++d+++++aYqtav+igGh+fkGiL dqG+e+
  Pd.00g029190.m01   8 RTKGLELGNFPAEVSSPAVFRCVRVSSIEDDDDQYAYQTAVNIGGHLFKGILNDQGPET 66 
                       556778889************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MRTWQLSRTK GLELGNFPAE VSSPAVFRCV RVSSIEDDDD QYAYQTAVNI GGHLFKGILN  60
DQGPETSNYN MNMAAAAAAA ETSSGGGGVN IQPLNLIAGA TTAANTATIG GGDDEGVAGA  120
STTVIDPSSL YPAPLNTYMA GTQFFLPPRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.15e-34SRS family protein