PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g027370.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NF-YB

Protein Properties

Length: 1060aa MW: 117018 Da PI: 5.3186

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g027370.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	176.5	2.6e-55	915	1008	1	94
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 vreqdr+lPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfedy++plkvyl++yr Pd.00g027370.m02 915 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLTRYR 1005 59***************************************************************************************** PP NF-YB 92 ele 94 e + Pd.00g027370.m02 1006 EGD 1008 966 PP

Sequence ? help Back to Top
Protein Sequence Length: 1060 aa Download sequence
MEISLLLFSL LLLIASSSAQ MPGFVSLDCG GEGVFTDELG LEWTPDQLNY GETSFISVVN 60 DKRKQYSTLR HFPPDSRKYC YTMNVTSRTR YLLRATFLYG NFDDNNVYPK FDISLGATHW 120 STIVISDATT IEMRELIFLA TSPTASVCLS NATTGQPFIS TLELRQFNGS VYYTDFEQQF 180 YLSVSARINF GADDEAPIRY PDDPFDRIWL SDSVKKANFL VDIADGTKKV STKLPIDVNR 240 DERPPEKVMQ TAVVGTNGSL TYRLNLDGFP GFGWAFTYFA EIEDLAPDES RKFRLVLPGN 300 SEVSKAIVNI EENAQGKYRL YEPGFTNLSL PFVLSFRFGK TSDSSNGPLL NAMEINKYLE 360 KNDGSQDGAV ISSFASHYSS ADWALEGGDP CLPVPWSWVE CNSDPQPRVV KIKLSSKNLT 420 GDIPSDLTKL SGLVELWLDG NSLTGPIPDF TGFVDLKIIH LENNQLTGGL PSSLTNLPSL 480 KELYVQNNML SGTVPLGLLN KVVLNYTGNV NLRKGKTSGS RVNIIIGTSV GAAVLVIVTI 540 VSCVLLRKGK KKYYDQDHQL GRPLPRQGLL STKSDSAPTE AAHCFSYSEI EEATRNFEKK 600 IGSGGFGVVY YGRMKDEREI AVKVLTSNSY QGKREFSNEV TLLSRIHHRN LVQFLGYCQE 660 DGRSMLVYEF MHNGTLKEHL YGPLTREQSI NWIKRLEIAE DAAKVDGASH VSSIVRGTVG 720 YLDPEYYISQ QLTDKSDVYS FGVILLELIS GQEAISNENF GVNCRNIVQW AKLHIESGDI 780 QGIIDPSLHG EYDIQSMWKI AEKALMCVQA HGFMRPSISE VLKEIQDAIS MERDAGAARD 840 GTSDASASRN SIPSSLNLGS MDLGGTDNFL SIDESIARPT ARPLNINRVS MAEAPGSPGG 900 GSHESGGDQS PRSNVREQDR YLPIANISRI MKKALPANGK IAKDAKETVQ ECVSEFISFI 960 TSEASDKCQR EKRKTINGDD LLWAMATLGF EDYIDPLKVY LTRYREGDTK GSGKGGDSSS 1020 KKDAQPSSNA QISRQGSFSQ GGNYSNSQSQ HMMVPMQGTE

Sequence ? help Back to Top

Protein Sequence Length: 1060 aa Download sequence

MEISLLLFSL LLLIASSSAQ MPGFVSLDCG GEGVFTDELG LEWTPDQLNY GETSFISVVN  60
DKRKQYSTLR HFPPDSRKYC YTMNVTSRTR YLLRATFLYG NFDDNNVYPK FDISLGATHW  120
STIVISDATT IEMRELIFLA TSPTASVCLS NATTGQPFIS TLELRQFNGS VYYTDFEQQF  180
YLSVSARINF GADDEAPIRY PDDPFDRIWL SDSVKKANFL VDIADGTKKV STKLPIDVNR  240
DERPPEKVMQ TAVVGTNGSL TYRLNLDGFP GFGWAFTYFA EIEDLAPDES RKFRLVLPGN  300
SEVSKAIVNI EENAQGKYRL YEPGFTNLSL PFVLSFRFGK TSDSSNGPLL NAMEINKYLE  360
KNDGSQDGAV ISSFASHYSS ADWALEGGDP CLPVPWSWVE CNSDPQPRVV KIKLSSKNLT  420
GDIPSDLTKL SGLVELWLDG NSLTGPIPDF TGFVDLKIIH LENNQLTGGL PSSLTNLPSL  480
KELYVQNNML SGTVPLGLLN KVVLNYTGNV NLRKGKTSGS RVNIIIGTSV GAAVLVIVTI  540
VSCVLLRKGK KKYYDQDHQL GRPLPRQGLL STKSDSAPTE AAHCFSYSEI EEATRNFEKK  600
IGSGGFGVVY YGRMKDEREI AVKVLTSNSY QGKREFSNEV TLLSRIHHRN LVQFLGYCQE  660
DGRSMLVYEF MHNGTLKEHL YGPLTREQSI NWIKRLEIAE DAAKVDGASH VSSIVRGTVG  720
YLDPEYYISQ QLTDKSDVYS FGVILLELIS GQEAISNENF GVNCRNIVQW AKLHIESGDI  780
QGIIDPSLHG EYDIQSMWKI AEKALMCVQA HGFMRPSISE VLKEIQDAIS MERDAGAARD  840
GTSDASASRN SIPSSLNLGS MDLGGTDNFL SIDESIARPT ARPLNINRVS MAEAPGSPGG  900
GSHESGGDQS PRSNVREQDR YLPIANISRI MKKALPANGK IAKDAKETVQ ECVSEFISFI  960
TSEASDKCQR EKRKTINGDD LLWAMATLGF EDYIDPLKVY LTRYREGDTK GSGKGGDSSS  1020
KKDAQPSSNA QISRQGSFSQ GGNYSNSQSQ HMMVPMQGTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	3e-62	NF-YB family protein