PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g024010.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 558aa MW: 61643.9 Da PI: 6.5599

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g024010.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.8	5.2e-33	339	393	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHerFveav++L G+ekAtPk +l++m+v+gLt++hvkSHLQkYRl Pd.00g024010.m01 339 RPRMRWTPELHERFVEAVNKLDGAEKATPKGVLKVMNVEGLTIYHVKSHLQKYRL 393 59****************************************************8 PP
2	Myb_DNA-binding	53.4	5.8e-17	341	392	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++v+av++l g t+k + + m+ +g+t +++ks++qky+ Pd.00g024010.m01 341 RMRWTPELHERFVEAVNKLDGAekaTPKGVLKVMNvEGLTIYHVKSHLQKYR 392 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MLKTQSFARS QRAKSKDANY KASSFAFYRD TFANPIAHEP RFYKILVHIT ILSKYKISIL 60 RSSTLEDGLS PEKTMLNVCP YTTYWWVGLP STIMSRHDII SVPQSETTKG MTQSYCTPKS 120 QMHDFLGSES EGRSLAGSEC SSARLSPFIR AESRGSPTNI RGSSVQHSQN TFSRSSVFCT 180 SLYQSSSSSS ETSRQLGNLP FLPHPPTYSQ SISAVDSKSP FLLSDDMSNQ YDDEQSEDLM 240 KDFLNLHGDG SHGSFHGISC GSDTLALTEQ LELQFLSDQL DMAITDNGEN PGLDEIYEIP 300 QASPKPSIGL TCSKSCQLTT PPVDALSSHP SPGPSPAHRP RMRWTPELHE RFVEAVNKLD 360 GAEKATPKGV LKVMNVEGLT IYHVKSHLQK YRLAKYMPEK REDKKASSSE EKKAASSSSE 420 SDGRRKGSIQ ITEALRMQME VQKQLHEQLE VQRALQLRIE DHAKYLQKIL EEQQKAGSAL 480 LSPQALSSLA TNSIQEPEQQ PSSSAGVSPT QPAESDSSSP LSLKHKATDS SESEPPACTK 540 KQCLEEKPDE GLVENPQQ

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MLKTQSFARS QRAKSKDANY KASSFAFYRD TFANPIAHEP RFYKILVHIT ILSKYKISIL  60
RSSTLEDGLS PEKTMLNVCP YTTYWWVGLP STIMSRHDII SVPQSETTKG MTQSYCTPKS  120
QMHDFLGSES EGRSLAGSEC SSARLSPFIR AESRGSPTNI RGSSVQHSQN TFSRSSVFCT  180
SLYQSSSSSS ETSRQLGNLP FLPHPPTYSQ SISAVDSKSP FLLSDDMSNQ YDDEQSEDLM  240
KDFLNLHGDG SHGSFHGISC GSDTLALTEQ LELQFLSDQL DMAITDNGEN PGLDEIYEIP  300
QASPKPSIGL TCSKSCQLTT PPVDALSSHP SPGPSPAHRP RMRWTPELHE RFVEAVNKLD  360
GAEKATPKGV LKVMNVEGLT IYHVKSHLQK YRLAKYMPEK REDKKASSSE EKKAASSSSE  420
SDGRRKGSIQ ITEALRMQME VQKQLHEQLE VQRALQLRIE DHAKYLQKIL EEQQKAGSAL  480
LSPQALSSLA TNSIQEPEQQ PSSSAGVSPT QPAESDSSSP LSLKHKATDS SESEPPACTK  540
KQCLEEKPDE GLVENPQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	1e-112	G2-like family protein