PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g022710.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 546aa    MW: 60772.9 Da    PI: 6.1269
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g022710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2631e-801575382374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL  cA a++ g+l+++q+lL  l+elas +gd+++Rlaa+ ++AL ++l++s ++ +++ p+ + ++++     ++l  f+evsP++ f 
  Pd.00g022710.m01 157 EQLLNPCALAITGGNLTRVQHLLYVLHELASLTGDANHRLAAHGLRALTQHLSSSAPHGSASAPSVTFASTEPRFFQKSLLKFYEVSPWFAFP 249
                       689*****************************************************************98888888888878*********** PP

              GRAS  95 hltaNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg...........skeeleetgerLakfAee 171
                       + +aN+ Il+ +++e    + +Hi+D ++s+G+QWp+Ll+aL+ Rp ++pp ++iT+v++++++                 +   rL  fA++
  Pd.00g022710.m01 250 NNIANSSILQLIAEEsdrtRNLHIVDVGVSHGMQWPTLLEALTRRPgGPPPLVKITVVSAAANTennqnretpfsIGPPGDNFSFRLLGFAKS 342
                       **********999998777889************************55566********99888777665555544455667788******** PP

              GRAS 172 lgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh...nsesFlerfleal 261
                       +++++++n l  + l++l+ + ++++++E+l+V+++++lh+l    +++++er+e+Lk++++++Pk v+++e+++++   n ++F+++f++ +
  Pd.00g022710.m01 343 MNINLQINRLDNQPLQNLNAQVIDTSNEEMLIVCVQFRLHNLN---HNTPDERTEFLKALRNMEPKGVILSENNMECscnNCGDFATGFSRQV 432
                       *********9999*****************************8...77777889*******************9665446778********** PP

              GRAS 262 eyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrvee 353
                       ey + ++ds+++ +    + r + Er++++ e+ ++++++g++    +e +ekW er++ +GF    ++e+a +  ++llrk++ ++++rv+e
  Pd.00g022710.m01 433 EYLWRFLDSTSSAF----KGRESDERRVMEGEAAKALTNRGEM----NEGKEKWCERMKGVGFVGQVFGEDAIDGGRALLRKYDsNWEMRVDE 517
                       **********6665....5555556666666699999999998....9************************************9999***** PP

              GRAS 354 esgslvlgWkdrpLvsvSaWr 374
                       ++g++ l Wk++p+ ++S W+
  Pd.00g022710.m01 518 KDGCAGLWWKGQPVSFCSLWK 538
                       ********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    
MTTQEPEPNS TSDHILDWLE DSVTFFPTFL DDPYHSNDIN GLQWWDESHD LIHSNTTSTS  60
LNNLTSIALP TTTRPPDPTN LNQQSPSDSS KKRKVSDDQL IDQKNHVRPI SQAGQGDQLV  120
EEVVVPVKRT NGNKKGTAKT TGNNCNNGNS KEGRWAEQLL NPCALAITGG NLTRVQHLLY  180
VLHELASLTG DANHRLAAHG LRALTQHLSS SAPHGSASAP SVTFASTEPR FFQKSLLKFY  240
EVSPWFAFPN NIANSSILQL IAEESDRTRN LHIVDVGVSH GMQWPTLLEA LTRRPGGPPP  300
LVKITVVSAA ANTENNQNRE TPFSIGPPGD NFSFRLLGFA KSMNINLQIN RLDNQPLQNL  360
NAQVIDTSNE EMLIVCVQFR LHNLNHNTPD ERTEFLKALR NMEPKGVILS ENNMECSCNN  420
CGDFATGFSR QVEYLWRFLD STSSAFKGRE SDERRVMEGE AAKALTNRGE MNEGKEKWCE  480
RMKGVGFVGQ VFGEDAIDGG RALLRKYDSN WEMRVDEKDG CAGLWWKGQP VSFCSLWKTD  540
VKVGNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-158GRAS family protein