PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g022510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 289aa    MW: 32794.8 Da    PI: 6.6626
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g022510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.15.6e-151562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT  Ed++l ++++ +G g W+  +++ g++R++k+c++rw++yl
  Pd.00g022510.m01 15 RGAWTGMEDKILREYIRVHGEGKWRNLPKRAGLKRCGKSCRLRWLNYL 62
                      89********************************************97 PP
2Myb_DNA-binding51.22.8e-1668111146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+ T +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++
  Pd.00g022510.m01  68 RGNITRDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 111
                       7899******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MGRSPCCSKD EGLNRGAWTG MEDKILREYI RVHGEGKWRN LPKRAGLKRC GKSCRLRWLN  60
YLRPDIKRGN ITRDEEELII RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN TRIGKKIQGH  120
PFSDGNRKPP KQTQENPKPT QPPKVDTNSC TKVVRTKASR CTKVFIPQEA QNLDDQIRDD  180
NAHVSNNAPL VAVDQVTDQV AGIEEPLSSV FPLDDENSSC EFMVDFKMDE NFLSDFLNVD  240
FSELYNNGND EGGSVASATT CDKVPDFQSS SMVPVIDYDL DWLIDNTAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.11e-63MYB family protein