PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g020340.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 511aa MW: 58683.5 Da PI: 7.9638

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g020340.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.1	5.1e-17	42	124	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA++vGF +r+ +s+ks+r+g+i++r + C + ++ +++ +r C+a++ +++ek g w+v+k+ ++HnH+l+ Pd.00g020340.m01 42 FYDDYASRVGFLTRVLSSRKSERDGSIISRGLGCRGVSDNGRKVM------QKECGQREFCTAMVLLRQEKPGSWVVKKFLKDHNHPLV 124 9*******************************87766666554......488999****************************96 PP
2	FAR1	80.4	3.3e-25	339	429	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 Y+ Y++++GF++r++++++s +++ i+ r+fvCskeg+r+e+ +++r +r+ tr gC+a+l+++ ++ gkw+++ +++eHnHel+p Pd.00g020340.m01 339 LYEMYGRHMGFTIRNNRTRRSLKDNAIIGREFVCSKEGFRAEKYAM-SQNRVlpSRPATRKGCNAMLRITAKDGGKWVIYGFVKEHNHELNP 429 7******************9****************9887.33333459********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MDDQNGTIYT SEGGETNIVE VSTNQEPYEG MLFESEDAAR VFYDDYASRV GFLTRVLSSR 60 KSERDGSIIS RGLGCRGVSD NGRKVMQKEC GQREFCTAMV LLRQEKPGSW VVKKFLKDHN 120 HPLVVQSQKS RRTLDEKDKK IQELTAQLRV KKRLSAAYRE QLLAFMKDVE DHNNHLSIKV 180 QSVFDNLKVL EAKASPFLLE DVFIICPFWN LRFEIFVLGG TIRGGPKSSI DSKTSFAGQF 240 TKISDCRTQK NAKIILGFQF LLLARLMMAS TSGQGFSPER NYRCWLDETF SSHETADDEL 300 SYTPDVDNNL IETSSQDFSL SLEPVIGMEF ESAEDARDLY EMYGRHMGFT IRNNRTRRSL 360 KDNAIIGREF VCSKEGFRAE KYAMSQNRVL PSRPATRKGC NAMLRITAKD GGKWVIYGFV 420 KEHNHELNPN KIPPRRSHRI AFCEDEKDLK IRELSTELHR EKKKSAAYQE KLQIVLKYIE 480 EHTQRLSLKV ELATNNMREL ESEEQDSSYS D

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MDDQNGTIYT SEGGETNIVE VSTNQEPYEG MLFESEDAAR VFYDDYASRV GFLTRVLSSR  60
KSERDGSIIS RGLGCRGVSD NGRKVMQKEC GQREFCTAMV LLRQEKPGSW VVKKFLKDHN  120
HPLVVQSQKS RRTLDEKDKK IQELTAQLRV KKRLSAAYRE QLLAFMKDVE DHNNHLSIKV  180
QSVFDNLKVL EAKASPFLLE DVFIICPFWN LRFEIFVLGG TIRGGPKSSI DSKTSFAGQF  240
TKISDCRTQK NAKIILGFQF LLLARLMMAS TSGQGFSPER NYRCWLDETF SSHETADDEL  300
SYTPDVDNNL IETSSQDFSL SLEPVIGMEF ESAEDARDLY EMYGRHMGFT IRNNRTRRSL  360
KDNAIIGREF VCSKEGFRAE KYAMSQNRVL PSRPATRKGC NAMLRITAKD GGKWVIYGFV  420
KEHNHELNPN KIPPRRSHRI AFCEDEKDLK IRELSTELHR EKKKSAAYQE KLQIVLKYIE  480
EHTQRLSLKV ELATNNMREL ESEEQDSSYS D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	2e-57	FAR1 family protein