PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g018990.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 380aa MW: 43085.5 Da PI: 9.2262 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 66.9 | 5.1e-21 | 48 | 134 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA+e+ Fsvr +skks ++ge++++++vC+keg+ ++e+++ +r+r + r +Cka+l+v k+k g ++vt +e+ H+H+++ Pd.00g018990.m01 48 DFYNQYAREAEFSVRSYSSKKS-KDGEVIRKEYVCNKEGSWSTETSS--VVKRRRGVGRESCKARLTVVKSKYGGYVVTIFEEAHTHPMT 134 6*****************9999.8889****************9988..77888999******************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence |
MEANNGILVH METDSETNPS VSIFYPQVIG ELTPFQGQQF ETLEEVYDFY NQYAREAEFS 60 VRSYSSKKSK DGEVIRKEYV CNKEGSWSTE TSSVVKRRRG VGRESCKARL TVVKSKYGGY 120 VVTIFEEAHT HPMTTPRRRH LLKSHRRISG VDQLVAQQLI SVNVSTHQQY DILATQAGGI 180 ENVGFTQQDM YNSNRDRHQY ILKRWTRSAR SDLVVDNDGV EISVDNCLIG KRSALFQRYS 240 NVIDKVILSD EASQIFCETL DSLIERIKPL LHGAEEVLPS ARRSIAFETS INEPDPVKAK 300 GSGKRLKGRK ELAREKYKGR RCNGCGKYGQ THDKRNCPTL QKSSSNVDKD AFNGMDNSSS 360 SQMMFRSPVI PPISRVVELH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-19 | FAR1 family protein |