PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g011660.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 93aa    MW: 10536.3 Da    PI: 8.4968
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g011660.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26092.16.7e-29892184
            DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklq 84
                      +C aCk+l+++C+++C++apyf +e+   +f  +h +FGas+++++l+ lp +er  a  ++++eA+ara dP+yG+v+ il+lq
  Pd.00g011660.m01  8 PCGACKFLKKRCKRGCIFAPYFMHEEaITDFSSIHNVFGASKMSRILSMLPMSERAVASWTMTFEAHARAVDPIYGCVSYILDLQ 92
                      7*********************999856*****************************************************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MSSRTFNPCG ACKFLKKRCK RGCIFAPYFM HEEAITDFSS IHNVFGASKM SRILSMLPMS  60
ERAVASWTMT FEAHARAVDP IYGCVSYILD LQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42440.13e-37LBD family protein