PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g011650.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | YABBY | ||||||||
Protein Properties | Length: 219aa MW: 24373.7 Da PI: 8.4007 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 226.1 | 9.1e-70 | 13 | 182 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaae.shldeslkee..lleelkveeenlksnvekees 91 d+ seq+Cyv+Cn C+t+lavsvP tslfk+vtvrCGhCt+ll vn++ + + +hl++s+ + ++l e n n ++++ Pd.00g011650.m01 13 DHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQfHHLGHSFFSSpnNSHNLLEEIPNPAPNFLMNQT 105 577899****************************************87776654444432456666544322333333333444444444444 PP YABBY 92 astsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + ++ ++ ++ +e+pr+p + rPPekrqrvPsaynrfik+eiqrik+ nPdishreafsaaaknWahfP+ihfgl Pd.00g011650.m01 106 SVNDFAVR--PRGGADELPRPPAITRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGL 182 44444442..688899*************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MSSSSSASTL SLDHLPPSEQ LCYVHCNICD TVLAVSVPCT SLFKTVTVRC GHCTNLLPVN 60 MRGLLLPSPN QFHHLGHSFF SSPNNSHNLL EEIPNPAPNF LMNQTSVNDF AVRPRGGADE 120 LPRPPAITRP PEKRQRVPSA YNRFIKDEIQ RIKSVNPDIS HREAFSAAAK NWAHFPHIHF 180 GLMPDQTVKK TNVRQQEGED VLMKDGFLAS ANNVRVSPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 4e-79 | YABBY family protein |