PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g009510.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 278aa MW: 31391 Da PI: 8.3108

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g009510.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106	2.1e-33	28	82	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LH+rFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl Pd.00g009510.m01 28 KPRLRWTPDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 82 79****************************************************8 PP
2	Myb_DNA-binding	68.6	1.1e-21	30	81	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ Pd.00g009510.m01 30 RLRWTPDLHDRFVDAVTKLGGPdkaTPKSVLRLMGlKGLTLYHLKSHLQKYR 81 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MERNYGGVCD GEGNCGYENG VMMTRDPKPR LRWTPDLHDR FVDAVTKLGG PDKATPKSVL 60 RLMGLKGLTL YHLKSHLQKY RLGQHARKQN SGEEHNRENN RDSYVHFSNH HSTGSGAKSS 120 RGGNAEQGTL PFSEALKCQI EVQNRLQEQL EVQKKLQMRI EAQGKYLQAI LEKAQKGLSL 180 DMKGPTTIEA TRAQLTDFNL ALSNFMENIN EEDRRGKSNG STFEIYEEGN TEENKDAKLK 240 VERGSINFDL NTKGSYDYVG SNAGDFEPRC FRLRDTTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	4e-73	G2-like family protein