PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g004500.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 512aa MW: 59791.7 Da PI: 8.8369 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 50.7 | 6.1e-16 | 1 | 70 | 58 | 127 |
NAM 58 wyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyr 127 +yfF++ ++k + ++ ++r++++gyW t k +++ + ++e +g+kk+L fy gr+++ ++kt+W+m ey Pd.00g004500.m01 1 MYFFTRVERKFTDSTLPRRKARNGYWIPTSKYENIEQ-GTEIIGVKKSLRFYAGRHRNaSTKTNWTMLEYI 70 5**********************************99.999***********997665157*********6 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 512 aa Download sequence |
MYFFTRVERK FTDSTLPRRK ARNGYWIPTS KYENIEQGTE IIGVKKSLRF YAGRHRNAST 60 KTNWTMLEYI AGGTASAAVS QSHYFLYDWV LCKVYEEELS AKKVPESNNQ GNAANEEVTG 120 EQLHPHIRTS PLEDLFGAKK RRCLSKNSGQ LPLTICTSSY RRPCLPELPF EVIIEILSRL 180 PVESVLRFKC VCRQWCSTFQ EEDFIAKHWV RASPLRLPYR YVWDYKNSDS FYDQNFKLIG 240 NSCGLFLEKN YSSQVFRLRN FAMHQVLYLP HAPNAYINTM CFVLNLSTGE CKVAHFYIKG 300 NLDSEVGLKV LTVGIECHWR PLKLSNETIW GQHEKDLLKR HILKPNQTEG AAHYVEIIRA 360 GQDLYLEVQS FDFWTECFVT TRLPERVFGN LEKVFVFRWN HHLAVGEIVE EALNILVLED 420 FKDHKWSENK IVVPYKFLKD NPSLKNQIWA PVRVIYGKLE LQGLKSFLTY DMEREIITRI 480 EVGNDPDKEH FASHKPSLLT FKGMRPKRVR CD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69490.1 | 8e-15 | NAC family protein |