PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g004360.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 175aa MW: 20148.9 Da PI: 10.0148 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 53.3 | 9e-17 | 1 | 70 | 58 | 127 |
NAM 58 wyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyr 127 +yfF++ ++k + ++ ++r++++gyW t k +++ + ++e +g+kk+L fy gr+++ ++kt+W+m ey Pd.00g004360.m02 1 MYFFTRVERKFTDSTLPRRKARNGYWIPTSKYENIEQ-GTEIIGVKKSLRFYAGRHRNaSTKTNWTMLEYI 70 5**********************************99.999***********997665157*********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MYFFTRVERK FTDSTLPRRK ARNGYWIPTS KYENIEQGTE IIGVKKSLRF YAGRHRNAST 60 KTNWTMLEYI AGGTASAAVS QSHYFLYDWV LCKVYEEELS AKKVPESNNQ GNAANEEVTG 120 EQLHPHVDKN FPLGRSIWSK KEAMLVQEFR PITPNNMYKL ISKALLTGAS LRSHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 7e-16 | NAC family protein |