PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pav_sc0010972.1_g010.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 101aa MW: 11660.2 Da PI: 10.2089 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 64 | 3.7e-20 | 13 | 72 | 1 | 60 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamss 60 aCa+Ck +rrkC + +apyfp ++ ++f+n+hk+FG+sn++k+++ + +++r++a++s Pav_sc0010972.1_g010.1.br 13 ACASCKQQRRKCDETWEMAPYFPPSRYSEFQNAHKIFGVSNIQKIMAMAAPDQRQAAAKS 72 7*******************************************************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 101 aa Download sequence |
MENRDQGAAQ NHACASCKQQ RRKCDETWEM APYFPPSRYS EFQNAHKIFG VSNIQKIMAM 60 AAPDQRQAAA KSSSISTRRY TSRLQQVGYF ISFFRISLYP K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G06280.1 | 8e-15 | LBD family protein |