PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0009842.1_g030.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 241aa    MW: 26289 Da    PI: 5.3585
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0009842.1_g030.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2521.8e-1696145355
                        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                ++GVr+++ +g+ +AeIrdp++ng  +r++lg++ tae+A  a+++a+ k++g
  Pav_sc0009842.1_g030.1.mk  96 FRGVRRRP-WGKCAAEIRDPKKNG--ARVWLGTYETAEDAGLAYDRAAFKMRG 145
                                8*******.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MSTESITSSN WALLESIRQH LLDDDFETQA TFLASVAEDD APLYDCAPST SSSSHAHFGL  60
EGWGDTIAIL DHDLDRPNDV KVEARVNHAP PSARNFRGVR RRPWGKCAAE IRDPKKNGAR  120
VWLGTYETAE DAGLAYDRAA FKMRGSKAKL NFPHLIGSHD SEPGRVAPKR GSPEPSFSSA  180
TSSDDGGSPT LKRRKSGVDS ATKAKSEEAA EQFHVFQVDS LTLDGQLLVD ELYTYDGLLA  240
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-42ERF family protein