PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0007033.1_g040.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 326aa    MW: 35616.3 Da    PI: 10.0728
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0007033.1_g040.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.71.8e-31255312359
                                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYegeHnh+
  Pav_sc0007033.1_g040.1.mk 255 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPAMLVVTYEGEHNHS 312
                                99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MAVDFMGYRN SSFSAKLEEN AVQEAASGLE SVEKLIRLLS QAQQNQHQDK YPSMVMDMDC  60
RAVADVAVSK FKKVISLLGR TRTGHARFRR APLTLTSGSS SSSQNQAQTQ ETFVKQTPLE  120
STKVYHATPI QQIPPPLHHH STVLESTKDS STTINFSYSA TTSFMSSLTG DSDSKQPLSS  180
SAFQITNMSQ VSSAGKPPLS SASLKRKCSS DNLGSGKCGA GSSGRCHCSK KRKLRLKRVV  240
RVPAISLKMA DIPPDDYSWR KYGQKPIKGS PHPRGYYKCS SVRGCPARKH VERALDDPAM  300
LVVTYEGEHN HSLSVAETSN LILESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.11e-85WRKY family protein