PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0005746.1_g050.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 360aa    MW: 39846.3 Da    PI: 6.3585
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0005746.1_g050.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.9e-10159207553
                                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                                kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l   +
  Pav_sc0005746.1_g050.1.mk 159 KRAKRILANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQ 207
                                9****************************************99887655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MQDPANPKPD PSSSSQASQR PRMTTPFQDA SPSLSFRGSY HRRAQSEVQF RIPDDLDLLQ  60
DPFDGPSGSF EELGGSEDDL FCTYMDIEKL GSKLDDGPSD PKLENPGGSA ETGVGLGGEM  120
SARPRHRHSN SVDASLESIE AKKAMAPDKL AELWTVDPKR AKRILANRQS AARSKERKAR  180
YISELERKVQ TLQTEATTLS AQLTLFQRDT TGLSTENSEL KLRVQAMEQQ AQLRDALNDA  240
LKKELERLKI ATGEVLTHTD SYNMGMHQIP YSQSPFFPSQ SQAGQRDSQN IHMPQFHPFP  300
PNMSAPHQPM LSAAQSHACS DMLQQDSIGR FQGLDISNRG SHLVRPEGPS ISAGESNRRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.11e-113bZIP family protein