PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0005603.1_g060.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 65aa MW: 7626.74 Da PI: 11.086 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 24 | 65 | 2 | 47 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaai 47 y+GVr+++ +g+W++eIrd +rf+lg+f taeeAa+a++ Pav_sc0005603.1_g060.1.mk 24 NYRGVRQRP-WGKWAVEIRDlR-----GaTRFWLGTFTTAEEAARAYD 65 59*******.**********44.....36******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 65 aa Download sequence |
MPVFTQEEKA NNNKKGPKKK VKKNYRGVRQ RPWGKWAVEI RDLRGATRFW LGTFTTAEEA 60 ARAYD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33710.1 | 1e-18 | ERF family protein |