PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0005202.1_g010.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 1187aa MW: 130251 Da PI: 5.2459

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0005202.1_g010.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.3e-29	599	650	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ Pav_sc0005202.1_g010.1.mk 599 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 650 589***********************************************97 PP
2	RWP-RK	52.3	1.1e-16	852	878	26	52
RWP-RK 26 gvclTvLKriCRqyGIkRWPhRkiksl 52 +c+T+LKriCRq+GI+RWP+Rki+++ Pav_sc0005202.1_g010.1.mk 852 SICPTTLKRICRQHGISRWPSRKINKV 878 49***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1187 aa Download sequence
MEYPFSPKEK GSDHWASSRA QVENLGSLDV GTRNSISEDM FNNISELMNF DTYAGWCSPA 60 AMDQISASFG VPSCPSVTYV PLDALNFAEQ NGGALPGTEG GETFNVGESS FSGEDKIVFQ 120 QMDTPQFGVS TDSHDANDLA AKLNNGSFQQ NNVMEVGKYM ISRPPGLSLN EKMLKALSLF 180 KESSGGGILA QLWVPMKYGD HYLLSTCEQP YLLDHILAGY REVSRTFTFS AEEKQGSVLG 240 LPGRVFVSKV PEWTSNVSYY NKAEYLRVDH AVNHQVRGSI ALPVFNFDSE MSCCAVLELV 300 STKEKPNFDA EMEIVCNALQ AVNLRTTVPP RLLPQCLSMN QRAALAEITD VLRAVCHAHI 360 LPLALTWIPC CYSEGDGDEI RRVRVRGGIT NSNEKSILCI EETACYVNDR TMQGFVHACV 420 EHHLEEGEGI AGKALQSNHP FFLHDVKVYD IYEYPLVHHA RKYGLNAAVA IRLRSTYTGD 480 DDYILEFFLP VNVKGSSEQQ LLLNNLSGTM QKMCKSLRTV SDAELAGVQG CNTGVQKGPI 540 PNIPQQRNSQ TTSSDSEFNS MENMPSDVLN RRNGGIEAEN PREQAPGSRR QMEKKRSTAE 600 KNVSLSVLQQ YFSGSLKDAA KSIGVCPTTL KRICRQHGIS RWPSRKINKV NRSLKKIQTV 660 LDSVQGVEGG LKYDPTTGGF VATGSIIQEF DAQKSRLFPE KSLPVQNSEL VTQDPVPVPS 720 VSCNNGESFA IKLEEDGCCI PTSHEEGVKK QNIPLMPQRD SKPIAIEGNK WGHSKNSLKL 780 ENSDCHFVSQ SSSSLAAADD MDTGVDGDDG IVEYNQHTSS SLTDSSNCSG STLRSSSSQS 840 FEEQKQPNMN ASICPTTLKR ICRQHGISRW PSRKINKVNR SLKKIQTVLD SVQGVEGGLK 900 YDPTTGGFVA TGSIIQEFDA QKSRLFPEKS LPVQNSELVT QDPVPVPSVS CNNGESFAIK 960 LEEDGCCIPT SHEEGVKKQN IPLMPQRDSK PIAIEGNKWG HSKNSLKLEN SDCHFVSQSS 1020 SSLAAADDMD TGVDGDDGIV EYNQHTSSSL TDSSNCSGST LRSSSSQSFE EQKQPNMNAS 1080 SVENGSKIIV KATYKEDTIR FKFDPSVGCF QLYEEVAKRL KLQNGTFQLK YLDDEEEWVM 1140 LVSDADLREC LEILDDIGTR SVKFMVRDTP FGVGSSGSSN CFLAGGI

Sequence ? help Back to Top

Protein Sequence Length: 1187 aa Download sequence

MEYPFSPKEK GSDHWASSRA QVENLGSLDV GTRNSISEDM FNNISELMNF DTYAGWCSPA  60
AMDQISASFG VPSCPSVTYV PLDALNFAEQ NGGALPGTEG GETFNVGESS FSGEDKIVFQ  120
QMDTPQFGVS TDSHDANDLA AKLNNGSFQQ NNVMEVGKYM ISRPPGLSLN EKMLKALSLF  180
KESSGGGILA QLWVPMKYGD HYLLSTCEQP YLLDHILAGY REVSRTFTFS AEEKQGSVLG  240
LPGRVFVSKV PEWTSNVSYY NKAEYLRVDH AVNHQVRGSI ALPVFNFDSE MSCCAVLELV  300
STKEKPNFDA EMEIVCNALQ AVNLRTTVPP RLLPQCLSMN QRAALAEITD VLRAVCHAHI  360
LPLALTWIPC CYSEGDGDEI RRVRVRGGIT NSNEKSILCI EETACYVNDR TMQGFVHACV  420
EHHLEEGEGI AGKALQSNHP FFLHDVKVYD IYEYPLVHHA RKYGLNAAVA IRLRSTYTGD  480
DDYILEFFLP VNVKGSSEQQ LLLNNLSGTM QKMCKSLRTV SDAELAGVQG CNTGVQKGPI  540
PNIPQQRNSQ TTSSDSEFNS MENMPSDVLN RRNGGIEAEN PREQAPGSRR QMEKKRSTAE  600
KNVSLSVLQQ YFSGSLKDAA KSIGVCPTTL KRICRQHGIS RWPSRKINKV NRSLKKIQTV  660
LDSVQGVEGG LKYDPTTGGF VATGSIIQEF DAQKSRLFPE KSLPVQNSEL VTQDPVPVPS  720
VSCNNGESFA IKLEEDGCCI PTSHEEGVKK QNIPLMPQRD SKPIAIEGNK WGHSKNSLKL  780
ENSDCHFVSQ SSSSLAAADD MDTGVDGDDG IVEYNQHTSS SLTDSSNCSG STLRSSSSQS  840
FEEQKQPNMN ASICPTTLKR ICRQHGISRW PSRKINKVNR SLKKIQTVLD SVQGVEGGLK  900
YDPTTGGFVA TGSIIQEFDA QKSRLFPEKS LPVQNSELVT QDPVPVPSVS CNNGESFAIK  960
LEEDGCCIPT SHEEGVKKQN IPLMPQRDSK PIAIEGNKWG HSKNSLKLEN SDCHFVSQSS  1020
SSLAAADDMD TGVDGDDGIV EYNQHTSSSL TDSSNCSGST LRSSSSQSFE EQKQPNMNAS  1080
SVENGSKIIV KATYKEDTIR FKFDPSVGCF QLYEEVAKRL KLQNGTFQLK YLDDEEEWVM  1140
LVSDADLREC LEILDDIGTR SVKFMVRDTP FGVGSSGSSN CFLAGGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein