PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0004917.1_g030.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 172aa    MW: 19573.5 Da    PI: 8.3009
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0004917.1_g030.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.73.2e-3082140159
                                ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                +dDg++WrKYG+K+vk+s++pr+YY+C+s gC+vkk+ver++ed ++v++tY g Hnhe
  Pav_sc0004917.1_g030.1.br  82 MDDGFKWRKYGKKSVKNSPNPRNYYKCSSGGCNVKKRVERDREDSSYVITTYDGVHNHE 140
                                59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MDFDEFSDYF MLDYGVDDHQ DSSSLSIMSP EKSMADRSTG SSGGATSRNS NNNMKCRNEG  60
RRNKIEMGHR VAFRTKSELE VMDDGFKWRK YGKKSVKNSP NPRNYYKCSS GGCNVKKRVE  120
RDREDSSYVI TTYDGVHNHE SPCVLYYNQM PTPVDPNNIW TLRASSQSSA SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.13e-46WRKY family protein