PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0004901.1_g010.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 434aa MW: 48487.3 Da PI: 7.6885

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0004901.1_g010.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107	1e-33	61	115	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl Pav_sc0004901.1_g010.1.mk 61 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 115 79****************************************************8 PP
2	Myb_DNA-binding	65.7	8.3e-21	63	114	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ Pav_sc0004901.1_g010.1.mk 63 RLKWTPDLHERFIEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 114 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MMYHHQHHLQ NQHQHQHQGK NIHSSSSASS RMSIPSERHL FLQGDQNGSG DSGLVLSTDA 60 KPRLKWTPDL HERFIEAVNQ LGGADKATPK TVMKLMGIPG LTLYHLKSHL QKYRLSKNLH 120 GHATSGTSKI GTVPVAAERL SEANGTHMSN MSFGPQANKG LHISETLQMQ IEVQRRLHEQ 180 LEVQRHLQLR IEAQGKYLQS VLEKAQETLG RQNLGSVGLE AAKVQLSELV SKVSTQCLNS 240 AFTELKELQG LCPQQTQTTQ PTDCSMDSCL TSCEGSKKDQ EIHNSAMGLR ANYNGRELLD 300 EKEPMLQKPE LKWCEELKEN NMLLSSISND AAKRMFPVER RSSDLSMSIG CQGERWNIDS 360 NGNSEERLKG RSTDGSFLDR TNNRADSAKA ETEKVSRGYR SVPYFAAKLD LNTHDDNDAP 420 SSCKQFDLNG FSWS

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MMYHHQHHLQ NQHQHQHQGK NIHSSSSASS RMSIPSERHL FLQGDQNGSG DSGLVLSTDA  60
KPRLKWTPDL HERFIEAVNQ LGGADKATPK TVMKLMGIPG LTLYHLKSHL QKYRLSKNLH  120
GHATSGTSKI GTVPVAAERL SEANGTHMSN MSFGPQANKG LHISETLQMQ IEVQRRLHEQ  180
LEVQRHLQLR IEAQGKYLQS VLEKAQETLG RQNLGSVGLE AAKVQLSELV SKVSTQCLNS  240
AFTELKELQG LCPQQTQTTQ PTDCSMDSCL TSCEGSKKDQ EIHNSAMGLR ANYNGRELLD  300
EKEPMLQKPE LKWCEELKEN NMLLSSISND AAKRMFPVER RSSDLSMSIG CQGERWNIDS  360
NGNSEERLKG RSTDGSFLDR TNNRADSAKA ETEKVSRGYR SVPYFAAKLD LNTHDDNDAP  420
SSCKQFDLNG FSWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-144	G2-like family protein