PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0004735.1_g130.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 351aa    MW: 38946 Da    PI: 6.5937
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0004735.1_g130.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08196243455
                                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                +h+ +Er RR++iN ++  L+el+P +    +k    a +L + +++++sLq
  Pav_sc0004735.1_g130.1.mk 196 NHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQSLQ 243
                                79************************9....888999999999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MDPTGATVPG SILPGPEFES LQFREEIHRL MTLPPENASS FTALLELPPT QAMELLHLSP  60
EANSTPTPAA ISGEARVQHP FNSSLRFPTK PALIERAAKF SIFAGEGSPE TSSIPSNSGA  120
DLEKVKTEPV ETDSNPNLSQ LTLDATKNNQ RSSAKRKERE KKVKVSTKKS KSEIKEDADK  180
VPYVHVRARR GQATDNHSLA ERARREKINA RMKLLQELVP GCNKISGTAL VLDEIINHVQ  240
SLQRQVEFLS MRLAAVNPRI DFNLDSILAA ESGSLMEANF ANMVTPLMWP EVQINGNRQP  300
YHQQWHFDTH QPGWGREEET HTFITPEISL ISCDSSANSA TLQTSHLKME M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42300.11e-103bHLH family protein