PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0004456.1_g020.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 152aa    MW: 17214.1 Da    PI: 10.5689
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0004456.1_g020.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-1783129151
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 
                                + ++GVr++  +g+WvAeIr+p   + r +r +lg+f t  eAa a+++a+ 
  Pav_sc0004456.1_g020.1.mk  83 CSFRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTSTEAALAYDEAAC 129
                                579****999.**********8...3.35*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MCLSISHQTD ATTQRYTGQQ PPAAQKIYYR SLCQPYLLLP HFTKPRPSYC LNMEKVGKKA  60
TARMGRSRKG CMKGKGGPEN ALCSFRGVRQ RTWGKWVAEI REPNRGARLW LGTFNTSTEA  120
ALAYDEAACQ AQLARSQTII IIIICKFKLF KH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.17e-40ERF family protein