PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0004305.1_g230.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 363aa MW: 40497.4 Da PI: 8.7332

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0004305.1_g230.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.3	1.5e-24	79	123	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++ +k+CErH+hrgr+rsrk++e Pav_sc0004305.1_g230.1.mk 79 DPEPGRCRRTDGKKWRCSKEAYPESKYCERHMHRGRNRSRKPVEV 123 79****************************************985 PP
2	QLQ	55.5	1.8e-19	14	47	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT++Q+q+L++Q+l++Ky+a++ P+P +L+ + Pav_sc0004305.1_g230.1.mk 14 PFTPNQWQELEHQALIFKYMASGIPIPTDLVYSL 47 9*****************************9766 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MLSGNPNTAR NRYPFTPNQW QELEHQALIF KYMASGIPIP TDLVYSLKRR LDNSISSRLF 60 PHPPMGWGCY EMGFGRKVDP EPGRCRRTDG KKWRCSKEAY PESKYCERHM HRGRNRSRKP 120 VEVSSSTTTP PTTAATEHPS SSSSSALSSP NNKNLSKTSS YSLSPLSSSI STETQTQHHP 180 HQSNSSPYPF LNYPQSSSTS SRPLPGSVFS PQNNSSSATP HLFLNSGSYN NQAEKDYRYL 240 HGTKGSVDEL AFFPESSANG RSILTGGSSS CQPPMSSYRG YSQPQFQSLT DHHNPEVSQQ 300 SQEEEQHCFV WGTDFKSSRA IKTEKEAAET QKSLHHFFGD WQPPKSTDTW LDLSSNSGVP 360 NDG

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MLSGNPNTAR NRYPFTPNQW QELEHQALIF KYMASGIPIP TDLVYSLKRR LDNSISSRLF  60
PHPPMGWGCY EMGFGRKVDP EPGRCRRTDG KKWRCSKEAY PESKYCERHM HRGRNRSRKP  120
VEVSSSTTTP PTTAATEHPS SSSSSALSSP NNKNLSKTSS YSLSPLSSSI STETQTQHHP  180
HQSNSSPYPF LNYPQSSSTS SRPLPGSVFS PQNNSSSATP HLFLNSGSYN NQAEKDYRYL  240
HGTKGSVDEL AFFPESSANG RSILTGGSSS CQPPMSSYRG YSQPQFQSLT DHHNPEVSQQ  300
SQEEEQHCFV WGTDFKSSRA IKTEKEAAET QKSLHHFFGD WQPPKSTDTW LDLSSNSGVP  360
NDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-61	GRF family protein