PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0003570.1_g050.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 226aa MW: 25720.6 Da PI: 6.7746 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.1 | 1.3e-07 | 168 | 206 | 9 | 52 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 r RR+ri +++ L++l+P +K++ a++L +A++Y++ Pav_sc0003570.1_g050.1.mk 168 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVN 206 699*****************87.....8**************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MEINIDYTSK RAINSSGVDL DDDHASMEDP ILHQISSYEY SSLWPNLPLP HHPLHQIPSS 60 STAPPPPPPP NHHHHHHHQS IADHHDHHGH QMLLLAGGNN NNIFVELNEH EEDEEAGDGG 120 GGEEELGAMK EMMYKIAAMQ PVDIDPATIR RPKRRNVRIS DDPQSVAARH RRERISEKIR 180 ILQRLVPGGT KMDTASMLDE AIRYVNTNTQ QSSCRSRRRH HHHLLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00120.1 | 1e-39 | bHLH family protein |